RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 ADIGQ0VDE8 80 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 MAPRE2Q15555 327 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 HNRNPA1L2Q32P51 320 aaKnown RBP2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 FAM27D1Q5T7N8 215 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 ZCCHC24Q8N2G6 241 aaKnown RBP2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 RNF10Q8N5U6 811 aaKnown RBP2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 ZFAND1Q8TCF1 268 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 KLF14Q8TD94 323 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 CTRCQ99895 268 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 RTBDNQ9BSG5 229 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 TBL1XR1Q9BZK7 514 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 IL37Q9NZH6 218 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 BZW2Q9Y6E2 419 aaKnown RBP2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 ENPP4Q9Y6X5 453 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 CABIN1Q9Y6J0 2220 aa2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 NUP214P35658 2090 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P28-201ENST00000507778 NPHP4O75161 1426 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 LOC102724200A0A096LPH7 203 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 ANKRD20A5PA0PJZ0 165 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 TMEM72A0PK05 275 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 SEC14L6B5MCN3 397 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 MFNGO00587 321 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 GATCO43716 136 aaKnown RBP2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 NDUFS5O43920 106 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 GMDSO60547 372 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 CSTAP01040 98 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 RHOCP08134 193 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 OR5AL1P0C617 328 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 PAX6P26367 422 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 MPIP34949 423 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 ARR3P36575 388 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 GALR1P47211 349 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 IDH2P48735 452 aaKnown RBP2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 GDI2P50395 445 aaKnown RBP2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 GRB2P62993 217 aaKnown RBP2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 TRDNQ13061 729 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 FBXL19-AS1Q494R0 122 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 KPRPQ5T749 579 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 C16orf87Q6PH81 154 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 EPGNQ6UW88 154 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 ASCC1Q8N9N2 400 aaKnown RBP2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 OR13C9Q8NGT0 318 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 OR52N1Q8NH53 320 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 NDNFQ8TB73 568 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 HGDQ93099 445 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 CIDECQ96AQ7 238 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 TM6SF2Q9BZW4 377 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 CHRNA10Q9GZZ6 450 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 LINC00574Q9H8X3 128 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 RAB22AQ9UL26 194 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 DOCK9Q9BZ29 2069 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 PCM1Q15154 2024 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 MROH5Q6ZUA9 1318 aa2.17□□□□□ -2.06
HMGB1P28-201ENST00000507778 IGKV1-6A0A0C4DH72 117 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 FAM240AA0A1B0GVK7 77 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 C16orf90A8MZG2 172 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 ALOX12BO75342 701 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 PTNP21246 168 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 HTR2CP28335 458 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 CARD18P57730 90 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 RBX1P62877 108 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 LAMTOR4Q0VGL1 99 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 NDUFAF6Q330K2 333 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 SP6Q3SY56 376 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 TTC32Q5I0X7 151 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 SLC25A25Q6KCM7 469 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 MORN3Q6PF18 240 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 BBS7Q8IWZ6 715 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 FAM58AQ8N1B3 248 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 OR2M7Q8NG81 312 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 PDCD1LG2Q9BQ51 273 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 CA10Q9NS85 328 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 RWDD2AQ9UIY3 292 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 SLC7A11Q9UPY5 501 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 V9GYY9 64 aa2.16□□□□□ -2.06
HMGB1P28-201ENST00000507778 GSTTP1A0A1W2PQM5 241 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 RFXANKO14593 260 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 CNMDO75829 334 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 IGKV1-39P01597 117 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 IGKV1D-39P04432 117 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 RNASE2P10153 161 aaKnown RBP2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 CD9P21926 228 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 TAL2Q16559 108 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 CDNFQ49AH0 187 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 C6orf183Q5T699 404 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 C16orf47Q6ZP98 133 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 PDPNQ86YL7 162 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 SLC26A10Q8NG04 563 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 ORAOV1Q8WV07 137 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 C20orf144Q9BQM9 153 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 TMED9Q9BVK6 235 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 MAP1LC3CQ9BXW4 147 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 COA1Q9GZY4 146 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 DHX35Q9H5Z1 703 aaKnown RBP2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 ANKHQ9HCJ1 492 aa2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 DHCR7Q9UBM7 475 aaKnown RBP2.15□□□□□ -2.07
HMGB1P28-201ENST00000507778 RAB23Q9ULC3 237 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms