RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 IL1AP01583 271 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 GRPP07492 148 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 ERCC1P07992 297 aaPredicted RBP12.01□□□□□ -0.49
RNF4-208ENST00000507247 CD37P11049 281 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 ZNF93P35789 620 aaPredicted RBP12.01□□□□□ -0.49
RNF4-208ENST00000507247 RBP2P50120 134 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 ATP1B3P54709 279 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 MTCP1P56278 107 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 ZP1P60852 638 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 MPPED2Q15777 294 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 FAM76BQ5HYJ3 339 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 FAM209AQ5JX71 171 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 USP43Q70EL4 1123 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 ANGPTL5Q86XS5 388 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 C11orf53Q8IXP5 236 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 JAGN1Q8N5M9 183 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 OR5D18Q8NGL1 313 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 CCL19Q99731 98 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 METTL17Q9H7H0 456 aaPredicted RBP12.01□□□□□ -0.49
RNF4-208ENST00000507247 BATF3Q9NR55 127 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 C14orf119Q9NWQ9 140 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 NKIRAS2Q9NYR9 191 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 PMF1-BGLAPU3KQ54 211 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 V9GY05 133 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 UNC79Q9P2D8 2635 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 TEX15Q9BXT5 2789 aa12□□□□□ -0.49
RNF4-208ENST00000507247 LRP5LA4QPB2 252 aa12□□□□□ -0.49
RNF4-208ENST00000507247 H7C417 338 aa12□□□□□ -0.49
RNF4-208ENST00000507247 MAGEB3O15480 346 aa12□□□□□ -0.49
RNF4-208ENST00000507247 PLATP00750 562 aa12□□□□□ -0.49
RNF4-208ENST00000507247 HPXP02790 462 aa12□□□□□ -0.49
RNF4-208ENST00000507247 TNFSF4P23510 183 aa12□□□□□ -0.49
RNF4-208ENST00000507247 PMELP40967 661 aa12□□□□□ -0.49
RNF4-208ENST00000507247 HAAOP46952 286 aa12□□□□□ -0.49
RNF4-208ENST00000507247 OR3A4PP47883 348 aa12□□□□□ -0.49
RNF4-208ENST00000507247 POU3F4P49335 361 aa12□□□□□ -0.49
RNF4-208ENST00000507247 SRP9P49458 86 aaKnown RBP12□□□□□ -0.49
RNF4-208ENST00000507247 GLT8D1Q68CQ7 371 aa12□□□□□ -0.49
RNF4-208ENST00000507247 FAM166AQ6J272 317 aa12□□□□□ -0.49
RNF4-208ENST00000507247 HAGHLQ6PII5 290 aaPredicted RBP12□□□□□ -0.49
RNF4-208ENST00000507247 ZNF826PQ6ZT77 177 aa12□□□□□ -0.49
RNF4-208ENST00000507247 CELF2-AS1Q8N7Q2 184 aa12□□□□□ -0.49
RNF4-208ENST00000507247 SCCPDHQ8NBX0 429 aa12□□□□□ -0.49
RNF4-208ENST00000507247 OR4D6Q8NGJ1 314 aa12□□□□□ -0.49
RNF4-208ENST00000507247 DGCR14Q96DF8 476 aaKnown RBP12□□□□□ -0.49
RNF4-208ENST00000507247 GPER1Q99527 375 aa12□□□□□ -0.49
RNF4-208ENST00000507247 TLNRD1Q9H1K6 362 aa12□□□□□ -0.49
RNF4-208ENST00000507247 CNTD2Q9H8S5 307 aa12□□□□□ -0.49
RNF4-208ENST00000507247 NEK6Q9HC98 313 aa12□□□□□ -0.49
RNF4-208ENST00000507247 UFSP2Q9NUQ7 469 aa12□□□□□ -0.49
RNF4-208ENST00000507247 FBXO9Q9UK97 447 aaPredicted RBP12□□□□□ -0.49
RNF4-208ENST00000507247 CRYBG3Q68DQ2 2970 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 TRIM64BA6NI03 449 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 SPRY1O43609 319 aaPredicted RBP11.99□□□□□ -0.49
RNF4-208ENST00000507247 SYNGR1O43759 233 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 NDUFS7O75251 213 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 RHBDL1O75783 438 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 SLC2A2P11168 524 aaPredicted RBP11.99□□□□□ -0.49
RNF4-208ENST00000507247 BMP4P12644 408 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 GATA4P43694 442 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 MZT1Q08AG7 82 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 TESK1Q15569 626 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 PCGF3Q3KNV8 242 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 C1orf100Q5SVJ3 147 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 HES5Q5TA89 166 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 SFXN4Q6P4A7 337 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 C1QL2Q7Z5L3 287 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 MOGAT3Q86VF5 341 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 ZNF573Q86YE8 665 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 TGIF2LYQ8IUE0 185 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 CDH26Q8IXH8 852 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 DYNC2LI1Q8TCX1 351 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 AQP3Q92482 292 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 BARHL1Q9BZE3 327 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 FAM192AQ9GZU8 254 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 SAP30LQ9HAJ7 183 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 DECR2Q9NUI1 292 aa11.99□□□□□ -0.49
RNF4-208ENST00000507247 IGKV1-12A0A0C4DH73 117 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 A6NLC8 198 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 IFITM5A6NNB3 132 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 NOTOA8MTQ0 251 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 J3QT63 122 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 SLC17A2O00624 439 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 CDIPTO14735 213 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 TPD52L2O43399 206 aaKnown RBP11.98□□□□□ -0.49
RNF4-208ENST00000507247 ANGPTL7O43827 346 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 IGKV1D-12P01611 117 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 MPZP25189 248 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 CFPP27918 469 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 HOXA4Q00056 320 aaPredicted RBP11.98□□□□□ -0.49
RNF4-208ENST00000507247 PDZK1IP1Q13113 114 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 SLC25A26Q70HW3 274 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 TNFAIP8L1Q8WVP5 186 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 SLC25A28Q96A46 364 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 SLC25A46Q96AG3 418 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 FOXRED1Q96CU9 486 aaPredicted RBP11.98□□□□□ -0.49
RNF4-208ENST00000507247 UQCC2Q9BRT2 126 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 PKIBQ9C010 78 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms