RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ISOC2Q96AB3 205 aa1.22□□□□□ -2.21
GYPB-207ENST00000506679 PLA2G12AQ9BZM1 189 aa1.22□□□□□ -2.21
GYPB-207ENST00000506679 CA10Q9NS85 328 aa1.22□□□□□ -2.21
GYPB-207ENST00000506679 ADA2Q9NZK5 511 aa1.22□□□□□ -2.21
GYPB-207ENST00000506679 ZNF230Q9UIE0 474 aaPredicted RBP1.22□□□□□ -2.21
GYPB-207ENST00000506679 RHBDD3Q9Y3P4 386 aa1.22□□□□□ -2.21
GYPB-207ENST00000506679 AQRO60306 1485 aaKnown RBP eCLIP1.22□□□□□ -2.21
GYPB-207ENST00000506679 ARPC4-TTLL3A0A0A6YYG9 625 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 A0A1W2PPV4 95 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 GSTTP1A0A1W2PQM5 241 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 ZNF99A8MXY4 864 aaPredicted RBP1.21□□□□□ -2.22
GYPB-207ENST00000506679 HACD1B0YJ81 288 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 LINC01619G3V211 115 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 H3BN98 237 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 SPOPO43791 374 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 UPK1BO75841 260 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 SCELO95171 688 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 ETHE1O95571 254 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 IGHV1-46P01743 117 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 MBP02144 154 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 MAS1P04201 325 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 KLK1P06870 262 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 MMP7P09237 267 aaPredicted RBP1.21□□□□□ -2.22
GYPB-207ENST00000506679 STAG3L2P0CL84 134 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 IL3RAP26951 378 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 GABRR2P28476 465 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 HNRNPA1L2Q32P51 320 aaKnown RBP1.21□□□□□ -2.22
GYPB-207ENST00000506679 WDR59Q6PJI9 974 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 Q6ZSR6 202 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 NDUFAF7Q7L592 441 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 OR2W3Q7Z3T1 314 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 DAZ4Q86SG3 579 aaKnown RBP1.21□□□□□ -2.22
GYPB-207ENST00000506679 SGPP2Q8IWX5 399 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 TRAM1L1Q8N609 369 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 LINC00469Q8N7U9 141 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 UBE2E2Q96LR5 201 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 RDH12Q96NR8 316 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 SCGB3A2Q96PL1 93 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 TMEM175Q9BSA9 504 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 GAL3ST2Q9H3Q3 398 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 ARMC7Q9H6L4 198 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 REEP1Q9H902 201 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 DAZ1Q9NQZ3 744 aaKnown RBP1.21□□□□□ -2.22
GYPB-207ENST00000506679 HEBP1Q9NRV9 189 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 TAS2R1Q9NYW7 299 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 ZNF492Q9P255 531 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 HMGXB4Q9UGU5 601 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 RWDD2AQ9UIY3 292 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 FLVCR2Q9UPI3 526 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 R4GN34 69 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 KIF27Q86VH2 1401 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 SBNO1A3KN83 1393 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 TNIKQ9UKE5 1360 aa1.21□□□□□ -2.22
GYPB-207ENST00000506679 MROH7Q68CQ1 1323 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 IGHV6-1A0A0B4J1U7 121 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 A0A0B4J2E0 115 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 E7EWF7 191 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 GATCO43716 136 aaKnown RBP1.2□□□□□ -2.22
GYPB-207ENST00000506679 SLC19A2O60779 497 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 CCDC22O60826 627 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 CATP04040 527 aaKnown RBP1.2□□□□□ -2.22
GYPB-207ENST00000506679 ZNF35P13682 527 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 TUBG1P23258 451 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 IVDP26440 423 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 MPIP34949 423 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 PRSS3P35030 304 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 ARL2P36404 184 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 NUP62P37198 522 aaPredicted RBP1.2□□□□□ -2.22
GYPB-207ENST00000506679 TAS2R60P59551 318 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 ATP6V0D1P61421 351 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 PPP1CAP62136 330 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 RPL18AQ02543 176 aaKnown RBP1.2□□□□□ -2.22
GYPB-207ENST00000506679 C2orf54Q08AI8 447 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 BIKQ13323 160 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 IHHQ14623 411 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 GABRA6Q16445 453 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 OR2T5Q6IEZ7 315 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 APOBEC3HQ6NTF7 200 aaKnown RBP1.2□□□□□ -2.22
GYPB-207ENST00000506679 LINC00336Q6ZUF6 198 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 BBS7Q8IWZ6 715 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 FAM58AQ8N1B3 248 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 ARHGAP18Q8N392 663 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 KIF2BQ8N4N8 673 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 RNF10Q8N5U6 811 aaKnown RBP1.2□□□□□ -2.22
GYPB-207ENST00000506679 FBXO36Q8NEA4 188 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 OR4M2Q8NGB6 313 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 OR51L1Q8NGJ5 315 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 OR13C9Q8NGT0 318 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 OR2T29Q8NH02 315 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 ZNF75CPQ92670 426 aaPredicted RBP1.2□□□□□ -2.22
GYPB-207ENST00000506679 FAM131CQ96AQ9 280 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 PKMYT1Q99640 499 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 PDCD1LG2Q9BQ51 273 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 MS4A8Q9BY19 250 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 FBXO44Q9H4M3 255 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 KIR3DX1Q9H7L2 352 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 TRIM45Q9H8W5 580 aaPredicted RBP1.2□□□□□ -2.22
GYPB-207ENST00000506679 PRSS16Q9NQE7 514 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 ZNF302Q9NR11 478 aa1.2□□□□□ -2.22
GYPB-207ENST00000506679 TUBG2Q9NRH3 451 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms