RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 PCDHGB1Q9Y5G3 927 aa12.91□□□□□ -0.34
CLDND1-211ENST00000506575 A0A1B0GW55 424 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 OR2AT4A6NND4 320 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 GPR37O15354 613 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 SYT7O43581 403 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 MPZL2O60487 215 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 PLATP00750 562 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 DUX4L2P0CJ85 424 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 DUX4L3P0CJ86 424 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 DUX4L4P0CJ87 422 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 DUX4L5P0CJ88 424 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 DUX4L6P0CJ89 424 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 DUX4L7P0CJ90 424 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 HAAOP46952 286 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 ELF3P78545 371 aaPredicted RBP12.9□□□□□ -0.34
CLDND1-211ENST00000506575 IL13RA1P78552 427 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 ZNF85Q03923 595 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 BAMBIQ13145 260 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 DUX4L9Q6RFH8 374 aaPredicted RBP12.9□□□□□ -0.34
CLDND1-211ENST00000506575 C9orf139Q6ZV77 190 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 ZNF573Q86YE8 665 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 ZDHHC22Q8N966 263 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 CCDC54Q8NEL0 328 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 AQP3Q92482 292 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 RORBQ92753 470 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 MRPL48Q96GC5 212 aaKnown RBP12.9□□□□□ -0.34
CLDND1-211ENST00000506575 WDFY2Q96P53 400 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 MYCBPQ99417 103 aaPredicted RBP12.9□□□□□ -0.34
CLDND1-211ENST00000506575 SLC29A1Q99808 456 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 ESM1Q9NQ30 184 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 ACOXLQ9NUZ1 547 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 DUX4Q9UBX2 424 aa12.9□□□□□ -0.34
CLDND1-211ENST00000506575 RPUSD1Q9UJJ7 312 aaKnown RBP12.9□□□□□ -0.34
CLDND1-211ENST00000506575 TENM1Q9UKZ4 2725 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 A6NIN4 97 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 E9PQ18 207 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 H3BSH0 61 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 UBCP0CG48 685 aaKnown RBP12.89□□□□□ -0.35
CLDND1-211ENST00000506575 CCL1P22362 96 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 GABRA2P47869 451 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 TGM4P49221 684 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 BPIFB3P59826 476 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 ARF6P62330 175 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
CLDND1-211ENST00000506575 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 C12orf54Q6X4T0 127 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 KCTD20Q7Z5Y7 419 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 ANGPTL6Q8NI99 470 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 H1FXQ92522 213 aaKnown RBP12.89□□□□□ -0.35
CLDND1-211ENST00000506575 GCDHQ92947 438 aaPredicted RBP12.89□□□□□ -0.35
CLDND1-211ENST00000506575 Q96MT0 163 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 CNTD2Q9H8S5 307 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 RASL12Q9NYN1 266 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 SLC7A11Q9UPY5 501 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 POLDIP2Q9Y2S7 368 aa12.89□□□□□ -0.35
CLDND1-211ENST00000506575 LOC100130705A0A1B0GUX0 176 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ANKRD61A6NGH8 418 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 J3QT63 122 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 FCN3O75636 299 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 SFTPBP07988 381 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 PDCD1Q15116 288 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ZSCAN26Q16670 478 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 SMIM21Q3B7S5 101 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 BRD3OSQ6XYD6 125 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 Q6ZSR3 168 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ENTHD1Q8IYW4 607 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 CMTM4Q8IZR5 234 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 PRSS35Q8N3Z0 413 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 FGFRL1Q8N441 504 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ACBD7Q8N6N7 88 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ZNF555Q8NEP9 628 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 TBX15Q96SF7 602 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ZMAT3Q9HA38 289 aaKnown RBP12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ONECUT1Q9UBC0 465 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 SLC25A10Q9UBX3 287 aaPredicted RBP12.88□□□□□ -0.35
CLDND1-211ENST00000506575 AASSQ9UDR5 926 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 ANK2Q01484 3957 aa12.88□□□□□ -0.35
CLDND1-211ENST00000506575 FBN3Q75N90 2809 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 LOC107986453A0A1B0GWG9 222 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 FAM230AA0A1W2PPH8 454 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 DNAJC9-AS1A6NH13 148 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 J3QRE1 110 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 HAX1O00165 279 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 SIGLEC5O15389 551 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 SLC16A6O15403 523 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 GATBO75879 557 aaKnown RBP12.87□□□□□ -0.35
CLDND1-211ENST00000506575 SERPINA3P01011 423 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 TFF1P04155 84 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 HTR1AP08908 422 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 ACAA1P09110 424 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-211ENST00000506575 PSG2P11465 335 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 SELLP14151 372 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 MMP9P14780 707 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 NDUFB7P17568 137 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 AMY2BP19961 511 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 PRTN3P24158 256 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms