RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 BEAN1Q3B7T3 259 aa17.16■□□□□ 0.34
SQSTM1-210ENST00000506042 CEACAM21Q3KPI0 293 aa17.16■□□□□ 0.34
SQSTM1-210ENST00000506042 ZBTB37Q5TC79 503 aa17.16■□□□□ 0.34
SQSTM1-210ENST00000506042 LINC01590Q5TEZ4 76 aa17.16■□□□□ 0.34
SQSTM1-210ENST00000506042 CD300LDQ6UXZ3 194 aa17.16■□□□□ 0.34
SQSTM1-210ENST00000506042 CYP2R1Q6VVX0 501 aa17.16■□□□□ 0.34
SQSTM1-210ENST00000506042 DHFR2Q86XF0 187 aa17.16■□□□□ 0.34
SQSTM1-210ENST00000506042 OR10G2Q8NGC3 310 aa17.16■□□□□ 0.34
SQSTM1-210ENST00000506042 LRGUKQ96M69 825 aa17.16■□□□□ 0.34
SQSTM1-210ENST00000506042 A0A0U1RQV5 110 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 FAM183AA6NL82 134 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 ZNF732B4DXR9 585 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 GNGT2O14610 69 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 FBXO24O75426 580 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 SELLP14151 372 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 RIPPLY1Q0D2K3 151 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 KLHL12Q53G59 568 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 SLC35D3Q5M8T2 416 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 GIPC3Q8TF64 312 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 SDSLQ96GA7 329 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 NKX3-1Q99801 234 aaPredicted RBP17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 MROQ9BYG7 248 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 TMEM14AQ9Y6G1 99 aa17.15■□□□□ 0.34
SQSTM1-210ENST00000506042 NOTCH1P46531 2555 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 ARRDC5A6NEK1 342 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 SNX3O60493 162 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 E2F6O75461 281 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 PSG2P11465 335 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 ANOS1P23352 680 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 ACTR3P61158 418 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 ZNF829Q3KNS6 432 aaPredicted RBP17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 ZNF684Q5T5D7 378 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 KPRPQ5T749 579 aaPredicted RBP17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 PLCXD3Q63HM9 321 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 DEGS2Q6QHC5 323 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 ZNF573Q86YE8 665 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 CALHM1Q8IU99 346 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 PNKDQ8N490 385 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 ZNRF1Q8ND25 227 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 CFHR4Q92496 578 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 SGCDQ92629 289 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 ENPP5Q9UJA9 477 aa17.14■□□□□ 0.33
SQSTM1-210ENST00000506042 G3V4G9 280 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 AMY2BP19961 511 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 ACKR3P25106 362 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 DCTDP32321 178 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 ELF3P78545 371 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 PRB3Q04118 309 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 SAMD5Q5TGI4 173 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 OR8B12Q8NGG6 310 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 OR13D1Q8NGV5 346 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 RPS4Y2Q8TD47 263 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 OR51I2Q9H344 312 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 MED20Q9H944 212 aa17.13■□□□□ 0.33
SQSTM1-210ENST00000506042 IGKV1D-17A0A075B6S4 117 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 TMEM269A0A1B0GVZ9 245 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 ZNF254O75437 659 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 PLBD1Q6P4A8 553 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 HAGHLQ6PII5 290 aaPredicted RBP17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 MOB3CQ70IA8 216 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 NDUFA11Q86Y39 141 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 C11orf44Q8N8P7 122 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 MRAPQ8TCY5 172 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 HPSE2Q8WWQ2 592 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 ASB17Q8WXJ9 295 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 PRRG3Q9BZD7 231 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 PRSS22Q9GZN4 317 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 YY1AP1Q9H869 796 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 ZNF319Q9P2F9 582 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 ARL2BPQ9Y2Y0 163 aa17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 TBL2Q9Y4P3 447 aaKnown RBP17.12■□□□□ 0.33
SQSTM1-210ENST00000506042 NXPH2O95156 264 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 RAP2AP10114 183 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 CEP78Q5JTW2 689 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 LCN8Q6JVE9 175 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 POC1AQ8NBT0 407 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 OR2T27Q8NH04 317 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 AQP3Q92482 292 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 YIPF3Q9GZM5 350 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 NECAP2Q9NVZ3 263 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 FOXJ3Q9UPW0 622 aa17.11■□□□□ 0.33
SQSTM1-210ENST00000506042 SELENOFO60613 162 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 CST1P01037 141 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 DLX1P56177 255 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 LOXL3P58215 753 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 PPP1R8Q12972 351 aaKnown RBP17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 ACP7Q6ZNF0 438 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 MKXQ8IYA7 352 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 CAPSLQ8WWF8 208 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 RORBQ92753 470 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 R3HDM4Q96D70 268 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 AMELYQ99218 206 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 FEVQ99581 238 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 PPP1R3EQ9H7J1 279 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 MOB1AQ9H8S9 216 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 ELL3Q9HB65 397 aaPredicted RBP17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 SIGLEC9Q9Y336 463 aa17.1■□□□□ 0.33
SQSTM1-210ENST00000506042 RFPL4AA6NLU0 287 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 VGLL3A8MV65 326 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms