RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MAPRE2Q15555 327 aa0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 TRMT10CQ7L0Y3 403 aaKnown RBP0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 CENPQQ7L2Z9 268 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 SLC30A8Q8IWU4 369 aa0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 ZCCHC24Q8N2G6 241 aaKnown RBP0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 RNF10Q8N5U6 811 aaKnown RBP0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 TSEN15Q8WW01 171 aaKnown RBP0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 ASZ1Q8WWH4 475 aa0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 RDH14Q9HBH5 336 aa0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 LYARQ9NX58 379 aaKnown RBP0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 NDRG2Q9UN36 371 aaKnown RBP0.87□□□□□ -2.27
HMGB1P29-201ENST00000505659 ZNF608Q9ULD9 1512 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 AK9Q5TCS8 1911 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 KCNE1BA0A087WTH5 132 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 A0A0B4J2C4 111 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 LINC01619G3V211 115 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 TEX46H3BTG2 121 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 FFAR1O14842 300 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 STOMP27105 288 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 TEAD1P28347 426 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 AP1S2P56377 157 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 OR2B8PP59922 312 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 LRRC74AQ0VAA2 488 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 ADIGQ0VDE8 80 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 ZNF567Q8N184 647 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 MCUR1Q96AQ8 359 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 SCGB3A2Q96PL1 93 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 GSDMAQ96QA5 445 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 GPR21Q99679 349 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 HIGD2AQ9BW72 106 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 FAM192AQ9GZU8 254 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 TMEM185BQ9H7F4 350 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 FANCEQ9HB96 536 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 TREX1Q9NSU2 369 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 NMRK1Q9NWW6 199 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 ZNF443Q9Y2A4 671 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 ENPP4Q9Y6X5 453 aa0.86□□□□□ -2.27
HMGB1P29-201ENST00000505659 TRGV4A0A0C4DH28 118 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 KBTBD11-OT1A0A1B0GTJ5 212 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 ZNF729A6NN14 1252 aaPredicted RBP0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 BCKDKO14874 412 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 CACNG3O60359 315 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 ARL14EPLP0DKL9 152 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 GZMHP20718 246 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 SLC6A1P30531 599 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 FOXF1Q12946 379 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 TFDP2Q14188 446 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 RCN1Q15293 331 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 GABRA6Q16445 453 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 SPANXN2Q5MJ10 180 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 KCTD16Q68DU8 428 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 TMEM220Q6QAJ8 160 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 BZW1Q7L1Q6 419 aaKnown RBP0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 SSX9Q7RTT3 188 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 COMTD1Q86VU5 262 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 UNC93AQ86WB7 457 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 MSRB3Q8IXL7 192 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 GABRG1Q8N1C3 465 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 JAGN1Q8N5M9 183 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 WDR31Q8NA23 367 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 FAM81AQ8TBF8 368 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 UBE2E2Q96LR5 201 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 TRIB3Q96RU7 358 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 NAPGQ99747 312 aaPredicted RBP0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 SAR1BQ9Y6B6 198 aa0.85□□□□□ -2.27
HMGB1P29-201ENST00000505659 INSRP06213 1382 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 PLXNB3Q9ULL4 1909 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 CTAGE15A4D2H0 777 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 PSCAO43653 123 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 HLA-HP01893 362 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 IFNW1P05000 195 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 HMOX2P30519 316 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 SLC1A2P43004 574 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 RPS15P62841 145 aaKnown RBP0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 MERTKQ12866 999 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 DHRS2Q13268 280 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 RWDD4Q6NW29 188 aaKnown RBP0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 Q6ZSA8 131 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 LUZP2Q86TE4 346 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 CTAGE6Q86UF2 777 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 BBS5Q8N3I7 341 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 PQLC3Q8N755 202 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 ZDHHC22Q8N966 263 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 Q8NAQ8 132 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 OR10D4PQ8NGN7 298 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 OR1S1Q8NH92 325 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 RNASE11Q8TAA1 199 aaKnown RBP0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 APH1AQ96BI3 265 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 SMARCD1Q96GM5 515 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 PPP1R36Q96LQ0 422 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 TMEM175Q9BSA9 504 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 GEMIN7Q9H840 131 aaKnown RBP0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 CHTOPQ9Y3Y2 248 aaKnown RBP0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 TRAPPC1Q9Y5R8 145 aa0.84□□□□□ -2.27
HMGB1P29-201ENST00000505659 FLG2Q5D862 2391 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 A0A075B6Q4 140 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 A0A1B0GU33 70 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 G3V3Q6 166 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 ISLRO14498 428 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms