RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CHD3Q12873 2000 aaKnown RBP8.86□□□□□ -0.99
TPM3-217ENST00000504663 A0A0G2JMP0 313 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 A0A0X1KG70 313 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 ZSCAN5BA6NJL1 495 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 ABCD4O14678 606 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 CLDN14O95500 239 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 IGHV3-13P01766 116 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 HLA-DQB1P01920 261 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 CRYAAP02489 173 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 ARSBP15848 533 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 RAB6AP20340 208 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 CA6P23280 308 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 CDK2P24941 298 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 PTAFRP25105 342 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 MPZP25189 248 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 PTGFRP43088 359 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 FUT6P51993 359 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 BAK1Q16611 211 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 SPRNQ5BIV9 151 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 FAM76BQ5HYJ3 339 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 RGS7BPQ6MZT1 257 aaPredicted RBP8.85□□□□□ -0.99
TPM3-217ENST00000504663 MTFR2Q6P444 385 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 GLIPR1L1Q6UWM5 242 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 TMEM108Q6UXF1 575 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 OR2W3Q7Z3T1 314 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 ANGPTL5Q86XS5 388 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 C1orf174Q8IYL3 243 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 ZNF295-AS1Q8N0V1 137 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 Q8NFD4 153 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 OR8G5Q8NG78 346 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 OR4M2Q8NGB6 313 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 LILRB1Q8NHL6 650 aaPredicted RBP8.85□□□□□ -0.99
TPM3-217ENST00000504663 BORCS5Q969J3 196 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 TRIM63Q969Q1 353 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 DIRAS2Q96HU8 199 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 NICN1Q9BSH3 213 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 TMEM204Q9BSN7 226 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 MRPL37Q9BZE1 423 aaKnown RBP8.85□□□□□ -0.99
TPM3-217ENST00000504663 LPAR5Q9H1C0 372 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 KCNJ16Q9NPI9 418 aa8.85□□□□□ -0.99
TPM3-217ENST00000504663 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.84□□□□□ -0.99
TPM3-217ENST00000504663 FAM230AA0A1W2PPH8 454 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 ANKRD30BLA7E2S9 258 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 F8VVB4 439 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 F8VWA3 439 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 RAB27BO00194 218 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 SPRY1O43609 319 aaPredicted RBP8.84□□□□□ -0.99
TPM3-217ENST00000504663 ANGPTL7O43827 346 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 CDC14BO60729 498 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 PTBP3O95758 552 aaKnown RBP8.84□□□□□ -0.99
TPM3-217ENST00000504663 PLAUP00749 431 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 CSF3P09919 207 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 PTBP1P26599 531 aaKnown RBP eCLIP8.84□□□□□ -0.99
TPM3-217ENST00000504663 RBP2P50120 134 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 MTCP1P56278 107 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 PDZK1IP1Q13113 114 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 DCTN2Q13561 401 aaKnown RBP8.84□□□□□ -0.99
TPM3-217ENST00000504663 ZNF718Q3SXZ3 478 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 AWAT2Q6E213 333 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 ADAM5Q6NVV9 412 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 C11orf53Q8IXP5 236 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 IZUMO1Q8IYV9 350 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 PXT1Q8NFP0 134 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 OR5A2Q8NGI9 324 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 CA5BP1Q8WTZ4 195 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 TNFAIP8L1Q8WVP5 186 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 RAB40AQ8WXH6 277 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 NEUROG1Q92886 237 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 MRPL24Q96A35 216 aaKnown RBP8.84□□□□□ -0.99
TPM3-217ENST00000504663 BORCS8Q96FH0 119 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 CEP19Q96LK0 163 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 ADAT1Q9BUB4 502 aaKnown RBP8.84□□□□□ -0.99
TPM3-217ENST00000504663 TLNRD1Q9H1K6 362 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 OR51I2Q9H344 312 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 ZNF442Q9H7R0 627 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 PALMDQ9NP74 551 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 CA10Q9NS85 328 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 IL36GQ9NZH8 169 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 ZNF581Q9P0T4 197 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 ADAM30Q9UKF2 790 aa8.84□□□□□ -0.99
TPM3-217ENST00000504663 TANC2Q9HCD6 1990 aa8.83□□□□□ -1
TPM3-217ENST00000504663 FABP12A6NFH5 140 aa8.83□□□□□ -1
TPM3-217ENST00000504663 FAM25AB3EWG3 89 aa8.83□□□□□ -1
TPM3-217ENST00000504663 FAM25CB3EWG5 89 aa8.83□□□□□ -1
TPM3-217ENST00000504663 FAM25GB3EWG6 89 aa8.83□□□□□ -1
TPM3-217ENST00000504663 ZNF732B4DXR9 585 aa8.83□□□□□ -1
TPM3-217ENST00000504663 E7EQL1 145 aa8.83□□□□□ -1
TPM3-217ENST00000504663 SMAD7O15105 426 aaKnown RBP8.83□□□□□ -1
TPM3-217ENST00000504663 CTDSPLO15194 276 aa8.83□□□□□ -1
TPM3-217ENST00000504663 SYNGR1O43759 233 aa8.83□□□□□ -1
TPM3-217ENST00000504663 LANCL1O43813 399 aa8.83□□□□□ -1
TPM3-217ENST00000504663 UPK1BO75841 260 aa8.83□□□□□ -1
TPM3-217ENST00000504663 SFTPBP07988 381 aa8.83□□□□□ -1
TPM3-217ENST00000504663 UBBP0CG47 229 aa8.83□□□□□ -1
TPM3-217ENST00000504663 PTHLHP12272 177 aa8.83□□□□□ -1
TPM3-217ENST00000504663 SELEP16581 610 aa8.83□□□□□ -1
TPM3-217ENST00000504663 NR4A2P43354 598 aa8.83□□□□□ -1
TPM3-217ENST00000504663 FABP6P51161 128 aa8.83□□□□□ -1
TPM3-217ENST00000504663 GPM6AP51674 278 aa8.83□□□□□ -1
TPM3-217ENST00000504663 ART1P52961 327 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms