RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TPBGQ13641 420 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 CNN3Q15417 329 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF773Q6PK81 442 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF367Q7RTV3 350 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 SERPINA12Q8IW75 414 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 C1orf87Q8N0U7 546 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 DNAAF1Q8NEP3 725 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 OR5D14Q8NGL3 314 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 TSEN15Q8WW01 171 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 MGLLQ99685 303 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 OR51I2Q9H344 312 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 DCAF16Q9NXF7 216 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 RNF7Q9UBF6 113 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 SLC7A11Q9UPY5 501 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 WIPI2Q9Y4P8 454 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 NPTNQ9Y639 398 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 ZANQ9Y493 2812 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 CSPG4Q6UVK1 2322 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 PNMA8CA0A1B0GUJ8 204 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 CYB5R3P00387 301 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 LHBP01229 141 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 IGHV2-70P01814 119 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 OCM2P0CE71 109 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 FOSL1P15407 271 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 CPEP16870 476 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 ATF1P18846 271 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 PCMT1P22061 227 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 USF1P22415 310 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 FUT6P51993 359 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 Q499Y3 187 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 DMRTC1Q5HYR2 192 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 WDR82Q6UXN9 313 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF826PQ6ZT77 177 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 KCTD8Q6ZWB6 473 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF573Q86YE8 665 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 CIARTQ8N365 385 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 MS4A15Q8N5U1 240 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 SCCPDHQ8NBX0 429 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 OR13C5Q8NGS8 318 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 OR10Z1Q8NGY1 313 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 THRSPQ92748 146 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 UFD1Q92890 307 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 RPL3LQ92901 407 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 TMEM106AQ96A25 262 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 SPSB1Q96BD6 273 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 COX4I2Q96KJ9 171 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 ZCCHC4Q9H5U6 513 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 C1orf123Q9NWV4 160 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
PDLIM5-208ENST00000504489 PPIAL4EA0A075B759 164 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 IGHV4-61A0A0C4DH41 118 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 IGKV1-9A0A0C4DH69 117 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 PPIAL4DF5H284 164 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 CDIPTO14735 213 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 TNFAIP8O95379 198 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 HSMCR30P0CW71 290 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 PPIAL4FP0DN26 164 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 CD99P14209 185 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 PRKACBP22694 351 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 RBMXP38159 391 aaKnown RBP10□□□□□ -0.81
PDLIM5-208ENST00000504489 SOX2P48431 317 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 BTG1P62324 171 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 HNRNPA0Q13151 305 aaKnown RBP10□□□□□ -0.81
PDLIM5-208ENST00000504489 AVPI1Q5T686 147 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 UBE2UQ5VVX9 321 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF529Q6P280 563 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 LRRC28Q86X40 367 aaPredicted RBP10□□□□□ -0.81
PDLIM5-208ENST00000504489 GCSAMQ8N6F7 178 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF671Q8TAW3 534 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 FCGR1BQ92637 280 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 C18orf12Q96KH6 178 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 OPALINQ96PE5 141 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 NEK6Q9HC98 313 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 PPIAL4AQ9Y536 164 aa10□□□□□ -0.81
PDLIM5-208ENST00000504489 TRBV5-7A0A0A0MS05 114 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 FAM230AA0A1W2PPH8 454 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 hCG_1807616A0A1W2PRN6 198 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 SRRM5B3KS81 715 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF879B4DU55 563 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 J3QT63 122 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 WNT9BO14905 357 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 SULT1B1O43704 296 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 GPX5O75715 221 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 ACAA1P09110 424 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 MPZP25189 248 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 AZGP1P25311 298 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 MDH2P40926 338 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 RBP2P50120 134 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 ATP1B3P54709 279 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 ZMYND11Q15326 602 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 TRAM1Q15629 374 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 TMEM155Q4W5P6 130 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 LIPKQ5VXJ0 399 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 HAGHLQ6PII5 290 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 UNQ9370/PRO34162Q6UXP9 181 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 LHFPL2Q6ZUX7 228 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 PHC2Q8IXK0 858 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 MUC20Q8N307 709 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 OR13C9Q8NGT0 318 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 TRMT10AQ8TBZ6 339 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms