RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 IVDP26440 423 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 GPR4P46093 362 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 ERFP50548 548 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 HCCSP53701 268 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 CMC4P56277 68 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 IFFO1Q0D2I5 559 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 ADIGQ0VDE8 80 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 FUT5Q11128 374 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 XRCC4Q13426 336 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 KDM4DQ6B0I6 523 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 DAW1Q8N136 415 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 TRIML2Q8N7C3 387 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 OR2Z1Q8NG97 314 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 OR51A7Q8NH64 312 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 SFXN5Q8TD22 340 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 MSANTD3Q96H12 275 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 CENPNQ96H22 339 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 CEACAM18A8MTB9 384 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 LGALS9O00182 355 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 KDELR3O43731 214 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 RHOCP08134 193 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 LCN1P31025 176 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 ARR3P36575 388 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 PSMB2P49721 201 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 TAS2R60P59551 318 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 DNLZQ5SXM8 178 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 ZNF101Q8IZC7 436 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 FAM58AQ8N1B3 248 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 WDR34Q96EX3 536 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 TSNAXQ99598 290 aaKnown RBP2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 PRRG3Q9BZD7 231 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 TBL1XR1Q9BZK7 514 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 ULBP2Q9BZM5 246 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 TM6SF2Q9BZW4 377 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 ZSCAN16Q9H4T2 348 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 TREM1Q9NP99 234 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 IL20Q9NYY1 176 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 RAB23Q9ULC3 237 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 CFL2Q9Y281 166 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 PPIL1Q9Y3C6 166 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 KLF12Q9Y4X4 402 aa2.8□□□□□ -1.96
TRAPPC13-205ENST00000504243 BRCA1P38398 1863 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 UNC13AQ9UPW8 1703 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 ZNF608Q9ULD9 1512 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 AQRO60306 1485 aaKnown RBP eCLIP2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 SEC14L6B5MCN3 397 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 TRAPPC6AO75865 159 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 MAS1P04201 325 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 S100A6P06703 90 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 MMP7P09237 267 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 CD28P10747 220 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 PRSS3P35030 304 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 BLVRAP53004 296 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 SARNPP82979 210 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 LAMTOR4Q0VGL1 99 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 TRDNQ13061 729 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 MAPRE2Q15555 327 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 NDUFAF6Q330K2 333 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 FAM222AQ5U5X8 452 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 HHATQ5VTY9 493 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 ASCL4Q6XD76 172 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 SPATA24Q86W54 205 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 SYCE1Q8N0S2 351 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 OR5M1Q8NGP8 315 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 OR13C9Q8NGT0 318 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 CIDECQ96AQ7 238 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 MRPL48Q96GC5 212 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 ZBED3Q96IU2 234 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 FAM19A4Q96LR4 140 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 CHID1Q9BWS9 393 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 BEX2Q9BXY8 128 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 OR51B5Q9H339 312 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 SPACA1Q9HBV2 294 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 ANKHQ9HCJ1 492 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 VCX3AQ9NNX9 186 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 V9GYY9 64 aa2.79□□□□□ -1.96
TRAPPC13-205ENST00000504243 ANKRD12Q6UB98 2062 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 BRWD3Q6RI45 1802 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 LOC102724200A0A096LPH7 203 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 IGHV2OR16-5A0A0B4J2B6 119 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 A0A0G2JMP0 313 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 A0A0X1KG70 313 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 A8MWL6 223 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 J3QT63 122 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 IGLV2-8P01709 118 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 IGLV3-19P01714 112 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 APOA1P02647 267 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 GALR1P47211 349 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 RPL31P62899 125 aaKnown RBP2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 BTN1A1Q13410 526 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 FAM27D1Q5T7N8 215 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 COMTD1Q86VU5 262 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 ORMDL3Q8N138 153 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 LRRC20Q8TCA0 184 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 HGDQ93099 445 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 S100PBPQ96BU1 408 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 IP6K3Q96PC2 410 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 UTP23Q9BRU9 249 aaKnown RBP2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms