RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 FSTP19883 344 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 OTX1P32242 354 aaPredicted RBP9.75□□□□□ -0.85
LSM6-204ENST00000504181 DCTDP32321 178 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 RPS27P42677 84 aaKnown RBP9.75□□□□□ -0.85
LSM6-204ENST00000504181 CDX1P47902 265 aaPredicted RBP9.75□□□□□ -0.85
LSM6-204ENST00000504181 PRKCDQ05655 676 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 TIGD6Q17RP2 521 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 SLC36A3Q495N2 470 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 ZBED5Q49AG3 693 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 CXorf66Q5JRM2 361 aaPredicted RBP9.75□□□□□ -0.85
LSM6-204ENST00000504181 ACP7Q6ZNF0 438 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 ADCK1Q86TW2 530 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 STPG2Q8N412 459 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 ZNF561Q8N587 486 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 OR4P4Q8NGL7 312 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 SPSB4Q96A44 273 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 ST6GALNAC5Q9BVH7 336 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 FGF23Q9GZV9 251 aaPredicted RBP9.75□□□□□ -0.85
LSM6-204ENST00000504181 NSRP1Q9H0G5 558 aaKnown RBP9.75□□□□□ -0.85
LSM6-204ENST00000504181 HHLA2Q9UM44 414 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 B9D1Q9UPM9 204 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 HTR3EA5X5Y0 456 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 HLA-DQA2P01906 255 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 MED14OSP0DP75 135 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 ARHGDIBP52566 201 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 ST3GAL3Q11203 375 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 PRDX4Q13162 271 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 STX3Q13277 289 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 WHAMMP3Q1A5X7 153 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 GPR139Q6DWJ6 353 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 SLC35E3Q7Z769 313 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 SGPP2Q8IWX5 399 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 Q8N1Y9 231 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 LINC00471Q8N535 108 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 ZNF676Q8N7Q3 588 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 FAM156AQ8NDB6 213 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 C4orf3Q8WVX3 66 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 RASSF5Q8WWW0 418 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 REEP6Q96HR9 211 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 RNF170Q96K19 258 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 CLEC7AQ9BXN2 247 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 IER3IP1Q9Y5U9 82 aa9.74□□□□□ -0.85
LSM6-204ENST00000504181 hCG_38984A0A1B0GV85 526 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 ZNF850A8MQ14 1090 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 A8MZ25 164 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 BIRC5O15392 142 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 MTRF1O75570 445 aaKnown RBP9.73□□□□□ -0.85
LSM6-204ENST00000504181 DNAJC8O75937 253 aaPredicted RBP9.73□□□□□ -0.85
LSM6-204ENST00000504181 TK1P04183 234 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 GSK3AP49840 483 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 MTPNP58546 118 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 GFOD2Q3B7J2 385 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 KLHL12Q53G59 568 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 ASPHD1Q5U4P2 390 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 NANOGP8Q6NSW7 305 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 FOXRED2Q8IWF2 684 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 OR6Q1Q8NGQ2 317 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 OR5P3Q8WZ94 311 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 SPDL1Q96EA4 605 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 OR52B2Q96RD2 323 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 COPS4Q9BT78 406 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 NDEL1Q9GZM8 345 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 NRIP3Q9NQ35 241 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 DPM3Q9P2X0 92 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 RHCGQ9UBD6 479 aa9.73□□□□□ -0.85
LSM6-204ENST00000504181 LINC01548A6NM66 108 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 OVOL1O14753 267 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 OR8U8P0C7N1 319 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 PRDX2P32119 198 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 GPM6AP51674 278 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 EDDM3BP56851 147 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 GABPB1Q06547 395 aaPredicted RBP9.72□□□□□ -0.85
LSM6-204ENST00000504181 GPR50Q13585 617 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 PNLIPRP3Q17RR3 467 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 FAM76BQ5HYJ3 339 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 RNLSQ5VYX0 342 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 LYPD6Q86Y78 171 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 FUNDC1Q8IVP5 155 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 ZDHHC21Q8IVQ6 265 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 C17orf53Q8N3J3 647 aaPredicted RBP9.72□□□□□ -0.85
LSM6-204ENST00000504181 C5orf56Q8N8D9 126 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 HPSE2Q8WWQ2 592 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 DCUN1D4Q92564 292 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 SGK3Q96BR1 496 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 ZNF714Q96N38 554 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 TMEM133Q9H2Q1 129 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 FN3KQ9H479 309 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 KRCC1Q9NPI7 259 aaPredicted RBP9.72□□□□□ -0.85
LSM6-204ENST00000504181 MRPL22Q9NWU5 206 aaKnown RBP9.72□□□□□ -0.85
LSM6-204ENST00000504181 MPC1Q9Y5U8 109 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 SESN1Q9Y6P5 492 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 HERC1Q15751 4861 aa9.72□□□□□ -0.85
LSM6-204ENST00000504181 VPS13DQ5THJ4 4388 aa9.71□□□□□ -0.85
LSM6-204ENST00000504181 NDUFB2O95178 105 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 IGHG2P01859 326 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 ANXA2P07355 339 aaKnown RBP9.71□□□□□ -0.86
LSM6-204ENST00000504181 NOS3P29474 1203 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 SLC18A1P54219 525 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 EIF2B1Q14232 305 aaKnown RBP9.71□□□□□ -0.86
LSM6-204ENST00000504181 TAF13Q15543 124 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms