RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 PSMD11O00231 422 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 MPDU1O75352 247 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 CSTAP01040 98 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 MBP02144 154 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 INAFM2P0DMQ5 153 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 PTNP21246 168 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 IL3RAP26951 378 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 SPAM1P38567 509 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 CLDN18P56856 261 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 RAD51Q06609 339 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 ZNF33AQ06730 810 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 SYCP1Q15431 976 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 SLC9A3R2Q15599 337 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 ZNF678Q5SXM1 525 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 HHATQ5VTY9 493 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 ULK3Q6PHR2 472 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 FAM58AQ8N1B3 248 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 INO80EQ8NBZ0 244 aaPredicted RBP1.73□□□□□ -2.13
SUB1-204ENST00000504016 MNS1Q8NEH6 495 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 PROKR2Q8NFJ6 384 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 ZNF420Q8TAQ5 688 aaPredicted RBP1.73□□□□□ -2.13
SUB1-204ENST00000504016 C9orf72Q96LT7 481 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 DERL3Q96Q80 235 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 TEAD3Q99594 435 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 PDCD1LG2Q9BQ51 273 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 VSIRQ9H7M9 311 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 CYP3A43Q9HB55 503 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 PXMP2Q9NR77 195 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 ASF1BQ9NVP2 202 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 DDX19BQ9UMR2 479 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 NDRG2Q9UN36 371 aaKnown RBP1.73□□□□□ -2.13
SUB1-204ENST00000504016 ZNF257Q9Y2Q1 563 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 SEC16AO15027 2179 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 SHROOM3Q8TF72 1996 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 LOC100506127A0A0U1RQW1 187 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 A0A1W2PPV4 95 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 GSTTP1A0A1W2PQM5 241 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 E7EWF7 191 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 J3QRE1 110 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 SIVA1O15304 175 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 AKR7A2O43488 359 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 XRCC2O43543 280 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 CTNSO60931 367 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 YEATS4O95619 227 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 CATP04040 527 aaKnown RBP1.72□□□□□ -2.13
SUB1-204ENST00000504016 CRYGCP07315 174 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 CD9P21926 228 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 GPR1P46091 355 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 RPS5P46782 204 aaKnown RBP1.72□□□□□ -2.13
SUB1-204ENST00000504016 CD151P48509 253 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 TGM4P49221 684 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 ACOT2P49753 483 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 PSMD4P55036 377 aaKnown RBP1.72□□□□□ -2.13
SUB1-204ENST00000504016 FMODQ06828 376 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 INCA1Q0VD86 236 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 VAMP3Q15836 100 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 Q3ZCU0 254 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 HIKESHIQ53FT3 197 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 LIN9Q5TKA1 542 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 MLIPQ5VWP3 458 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 ZNF660Q6AZW8 331 aaPredicted RBP1.72□□□□□ -2.13
SUB1-204ENST00000504016 APRG1Q8IVJ8 170 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 SYCE1Q8N0S2 351 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 KIF2BQ8N4N8 673 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 SLC26A10Q8NG04 563 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 OR4D6Q8NGJ1 314 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 OR13C9Q8NGT0 318 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 OR52N1Q8NH53 320 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 LRRC20Q8TCA0 184 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 FXYD5Q96DB9 178 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 OTUB2Q96DC9 234 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 YIPF6Q96EC8 236 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 CERS2Q96G23 380 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 Q96MT0 163 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 RDH12Q96NR8 316 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 OPALINQ96PE5 141 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 TMEM175Q9BSA9 504 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 GAL3ST2Q9H3Q3 398 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 CHMP4BQ9H444 224 aaKnown RBP1.72□□□□□ -2.13
SUB1-204ENST00000504016 DUSP21Q9H596 190 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 REEP1Q9H902 201 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 LYRM4Q9HD34 91 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 OR2S2Q9NQN1 319 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 ZNF302Q9NR11 478 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 HEBP1Q9NRV9 189 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 TAS2R1Q9NYW7 299 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 AHSPQ9NZD4 102 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 FLVCR2Q9UPI3 526 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 PPIL1Q9Y3C6 166 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 ZSWIM8A7E2V4 1837 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 TNIKQ9UKE5 1360 aa1.72□□□□□ -2.13
SUB1-204ENST00000504016 ZNF608Q9ULD9 1512 aaPredicted RBP1.71□□□□□ -2.14
SUB1-204ENST00000504016 A0A0G2JMP0 313 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 A0A0X1KG70 313 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 ERICH2A1L162 156 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 HSBP1L1C9JCN9 74 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 PSPHP1O15172 72 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 CETN3O15182 167 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 PTHP01270 115 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 SEC11BP0C7V7 166 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms