RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ZMYND11Q15326 602 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 MOB3CQ70IA8 216 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 FAM214BQ7L5A3 538 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 OR52B4Q8NGK2 314 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 NANOS1Q8WY41 292 aaKnown RBP18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 PRRT1Q99946 306 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 PECRQ9BY49 303 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 ZNF436Q9C0F3 470 aaPredicted RBP18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 CHST6Q9GZX3 395 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 DLL4Q9NR61 685 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 KLK10O43240 276 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 SPRY1O43609 319 aaPredicted RBP18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 ANGPTL7O43827 346 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 SERPINA5P05154 406 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 BLVRBP30043 206 aaPredicted RBP18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 ATP1B3P54709 279 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 Q5BKY6 102 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 PLCXD3Q63HM9 321 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 MYOZ1Q9NP98 299 aaPredicted RBP18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 PLEKHA6Q9Y2H5 1048 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 STARD10Q9Y365 291 aa18.44■□□□□ 0.54
UBE2D3-216ENST00000503742 NGFP01138 241 aa18.43■□□□□ 0.54
UBE2D3-216ENST00000503742 HRH1P35367 487 aa18.43■□□□□ 0.54
UBE2D3-216ENST00000503742 MALLQ13021 153 aa18.43■□□□□ 0.54
UBE2D3-216ENST00000503742 NKPD1Q17RQ9 610 aa18.43■□□□□ 0.54
UBE2D3-216ENST00000503742 CD163Q86VB7 1156 aa18.43■□□□□ 0.54
UBE2D3-216ENST00000503742 GCNT2Q8N0V5 402 aa18.43■□□□□ 0.54
UBE2D3-216ENST00000503742 PXT1Q8NFP0 134 aa18.43■□□□□ 0.54
UBE2D3-216ENST00000503742 OR56B2PQ8NGI1 322 aa18.43■□□□□ 0.54
UBE2D3-216ENST00000503742 RANBP3Q9H6Z4 567 aaPredicted RBP18.43■□□□□ 0.54
UBE2D3-216ENST00000503742 TMEM82A0PJX8 343 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 CA11O75493 328 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 CBX5P45973 191 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 ARL6IP1Q15041 203 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 RSU1Q15404 277 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 LAMTOR1Q6IAA8 161 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 MDP1Q86V88 176 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 OR5M9Q8NGP3 310 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 WNT2BQ93097 391 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 FBXW5Q969U6 566 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 POFUT1Q9H488 388 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 IL36GQ9NZH8 169 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 IGKV1-12A0A0C4DH73 117 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 ZNF850A8MQ14 1090 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 SERPINE3A8MV23 424 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 ZNF780AO75290 641 aaPredicted RBP18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 IGKV1D-12P01611 117 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 CSN2P05814 226 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 IGHV1-2P23083 117 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 APLNRP35414 380 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 CXADRP78310 365 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 PDZK1IP1Q13113 114 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 SCGB2B2Q4G0G5 96 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 ATPAF1Q5TC12 328 aaPredicted RBP18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 Q6ZS92 163 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 MRPL21Q7Z2W9 205 aaKnown RBP18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 C9orf106Q8NAJ2 232 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 MRGPRFQ96AM1 343 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 OPA3Q9H6K4 179 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 PTTG3PQ9NZH4 202 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 MGAT4CQ9UBM8 478 aa18.42■□□□□ 0.54
UBE2D3-216ENST00000503742 HTR3BO95264 441 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 WNT5AP41221 380 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 ARFRP1Q13795 201 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 HLXQ14774 488 aaPredicted RBP18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 NLRC3Q7RTR2 1065 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 OR4K15Q8NH41 348 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 WBP1Q96G27 269 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 EIF3KQ9UBQ5 218 aaKnown RBP18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 GPR160Q9UJ42 338 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 AKAP13Q12802 2813 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 SPENQ96T58 3664 aaKnown RBP18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 UBE2QL1A1L167 161 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 CNOT4O95628 575 aaKnown RBP18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 PLATP00750 562 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 CST4P01036 141 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 CSTBP04080 98 aaKnown RBP18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 KIR2DL2P43627 348 aaPredicted RBP18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 MICBQ29980 383 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 SIGIRRQ6IA17 410 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 MUC20Q8N307 709 aaPredicted RBP18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 CCDC107Q8WV48 283 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 CA10Q9NS85 328 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 CRIM1Q9NZV1 1036 aa18.41■□□□□ 0.54
UBE2D3-216ENST00000503742 CACNA1GO43497 2377 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 AHRRA9YTQ3 701 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 PDGFAP04085 211 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 TGFBR3Q03167 851 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 PPA1Q15181 289 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 ACSF3Q4G176 576 aaPredicted RBP18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 ACTBL2Q562R1 376 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 VAX1Q5SQQ9 334 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 Q6ZT83 130 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 HOGA1Q86XE5 327 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 CSNK2A3Q8NEV1 391 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 OR11H4Q8NGC9 324 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 PIPOXQ9P0Z9 390 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 VSIG4Q9Y279 399 aa18.4■□□□□ 0.54
UBE2D3-216ENST00000503742 G3V3Q6 166 aa18.39■□□□□ 0.53
UBE2D3-216ENST00000503742 PMP2P02689 132 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms