RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 CD37P11049 281 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 CD200P41217 278 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 HAAOP46952 286 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 FAM209AQ5JX71 171 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 CALHM1Q8IU99 346 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 CDH26Q8IXH8 852 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 MEGF10Q96KG7 1140 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 GPER1Q99527 375 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 OR51I2Q9H344 312 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 METTL17Q9H7H0 456 aaPredicted RBP17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 CACNA1DQ01668 2161 aa17.3■□□□□ 0.36
CDC42SE2-206ENST00000503291 TMEM210A6NLX4 147 aa17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 SRP9P49458 86 aaKnown RBP17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 ZNF154Q13106 437 aa17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 ZNF573Q86YE8 665 aa17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 CELF2-AS1Q8N7Q2 184 aa17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 OR5D18Q8NGL1 313 aa17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 ITLN1Q8WWA0 313 aa17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 FOXRED1Q96CU9 486 aaPredicted RBP17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 LIME1Q9H400 295 aa17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 CNTD2Q9H8S5 307 aa17.29■□□□□ 0.36
CDC42SE2-206ENST00000503291 A0A0G2JK05 382 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 TPD52L2O43399 206 aaKnown RBP17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 MPPED2Q15777 294 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 PCGF3Q3KNV8 242 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 PRAMEF6Q5VXH4 476 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 DECR2Q9NUI1 292 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 LRP5LA4QPB2 252 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 NOTOA8MTQ0 251 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 PTBP3O95758 552 aaKnown RBP17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 PLATP00750 562 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 KRTAP10-9P60411 292 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 HAGHLQ6PII5 290 aaPredicted RBP17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 IGFBPL1Q8WX77 278 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 NRGNQ92686 78 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 SLC25A46Q96AG3 418 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 CPNE2Q96FN4 548 aaPredicted RBP17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 UQCC2Q9BRT2 126 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 PLGRKTQ9HBL7 147 aa17.28■□□□□ 0.36
CDC42SE2-206ENST00000503291 IFITM5A6NNB3 132 aa17.27■□□□□ 0.36
CDC42SE2-206ENST00000503291 CDKN1AP38936 164 aa17.27■□□□□ 0.36
CDC42SE2-206ENST00000503291 SCCPDHQ8NBX0 429 aa17.27■□□□□ 0.36
CDC42SE2-206ENST00000503291 SORCS2Q96PQ0 1159 aa17.27■□□□□ 0.36
CDC42SE2-206ENST00000503291 EGLN1Q9GZT9 426 aa17.27■□□□□ 0.36
CDC42SE2-206ENST00000503291 RAB1BQ9H0U4 201 aa17.27■□□□□ 0.36
CDC42SE2-206ENST00000503291 UFSP2Q9NUQ7 469 aa17.27■□□□□ 0.36
CDC42SE2-206ENST00000503291 CHD3Q12873 2000 aaKnown RBP17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 TRIM64BA6NI03 449 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 CDIPTO14735 213 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 OR3A4PP47883 348 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 POU3F4P49335 361 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 ZP1P60852 638 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 HNRNPA0Q13151 305 aaKnown RBP17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 C1orf100Q5SVJ3 147 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 HES5Q5TA89 166 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 SFXN4Q6P4A7 337 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 C11orf53Q8IXP5 236 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 PNLDC1Q8NA58 520 aaKnown RBP17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 OR4D6Q8NGJ1 314 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 CCL19Q99731 98 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 BARHL1Q9BZE3 327 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 SAP30LQ9HAJ7 183 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 A6NLC8 198 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 H7C417 338 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 OVOL3O00110 214 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 TMEM225BP0DP42 221 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 TNFRSF1AP19438 455 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 PTGFRP43088 359 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 GATA4P43694 442 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 PDZK1IP1Q13113 114 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 TESK1Q15569 626 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 DYNC2LI1Q8TCX1 351 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 TLNRD1Q9H1K6 362 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 DAPK2Q9UIK4 370 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 SPG11Q96JI7 2443 aa17.26■□□□□ 0.35
CDC42SE2-206ENST00000503291 AIPO00170 330 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 SLC17A2O00624 439 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 SPRY1O43609 319 aaPredicted RBP17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 SLC2A2P11168 524 aaPredicted RBP17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 ZNF182P17025 639 aaPredicted RBP17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 HTR2CP28335 458 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 RORCP51449 518 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 FAM166AQ6J272 317 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 ZNF826PQ6ZT77 177 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 SLC25A26Q70HW3 274 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 C1QL2Q7Z5L3 287 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 TNFAIP8L1Q8WVP5 186 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 AQP3Q92482 292 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 DCUN1D5Q9BTE7 237 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 GCM1Q9NP62 436 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 SYNGR1O43759 233 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 ANGPTL7O43827 346 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 RHBDL1O75783 438 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 HPXP02790 462 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 CLDN12P56749 244 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 RIN1Q13671 783 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 MOGAT3Q86VF5 341 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 OR6M1Q8NGM8 313 aa17.25■□□□□ 0.35
CDC42SE2-206ENST00000503291 USF3Q68DE3 2245 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 MPZP25189 248 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms