RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ZNF782Q6ZMW2 699 aaPredicted RBP18.97■□□□□ 0.63
PTPN13-205ENST00000502971 PXT1Q8NFP0 134 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 OR10K1Q8NGX5 313 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 PAPOLGQ9BWT3 736 aaKnown RBP18.97■□□□□ 0.63
PTPN13-205ENST00000502971 POFUT1Q9H488 388 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 PRORYQ9H606 182 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 CDH20Q9HBT6 801 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 OBP2BQ9NPH6 170 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.97■□□□□ 0.63
PTPN13-205ENST00000502971 ZNF221Q9UK13 617 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 A0A0A6YYJ9 748 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 FOXI3A8MTJ6 420 aaPredicted RBP18.96■□□□□ 0.63
PTPN13-205ENST00000502971 PEX14O75381 377 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 CSTBP04080 98 aaKnown RBP18.96■□□□□ 0.63
PTPN13-205ENST00000502971 CD74P04233 296 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 PRDX4Q13162 271 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 LINC00303Q3SY05 128 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 PLAC9Q5JTB6 97 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 RFPL4BQ6ZWI9 263 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 WDR31Q8NA23 367 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 ZNF71Q9NQZ8 489 aaPredicted RBP18.96■□□□□ 0.63
PTPN13-205ENST00000502971 PCDHB16Q9NRJ7 776 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 IL36GQ9NZH8 169 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 GPR160Q9UJ42 338 aa18.96■□□□□ 0.63
PTPN13-205ENST00000502971 A0A1W2PR80 420 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 CD300LBA8K4G0 201 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 ZNF736B4DX44 427 aaPredicted RBP18.95■□□□□ 0.62
PTPN13-205ENST00000502971 IDH3GP51553 393 aaPredicted RBP18.95■□□□□ 0.62
PTPN13-205ENST00000502971 GNG2P59768 71 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 RRAS2P62070 204 aaPredicted RBP18.95■□□□□ 0.62
PTPN13-205ENST00000502971 PDZK1IP1Q13113 114 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 RBMS2Q15434 407 aaKnown RBP18.95■□□□□ 0.62
PTPN13-205ENST00000502971 CXorf67Q86X51 503 aaPredicted RBP18.95■□□□□ 0.62
PTPN13-205ENST00000502971 ZDHHC23Q8IYP9 409 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 Q8NA96 180 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 ZSCAN4Q8NAM6 433 aaPredicted RBP18.95■□□□□ 0.62
PTPN13-205ENST00000502971 OR8S1Q8NH09 359 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 ST6GAL2Q96JF0 529 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 OPN3Q9H1Y3 402 aaPredicted RBP18.95■□□□□ 0.62
PTPN13-205ENST00000502971 GHITMQ9H3K2 345 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 NKIRAS2Q9NYR9 191 aa18.95■□□□□ 0.62
PTPN13-205ENST00000502971 MFNGO00587 321 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 SPRY1O43609 319 aaPredicted RBP18.94■□□□□ 0.62
PTPN13-205ENST00000502971 PRAF2O60831 178 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 RAB3DO95716 219 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 CELA3BP08861 270 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 TDGF1P3P51864 188 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 TSC22D1Q15714 1073 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 CEACAM21Q3KPI0 293 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 OR4D10Q8NGI6 311 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 NUDCD2Q8WVJ2 157 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 DVL3Q92997 716 aaPredicted RBP18.94■□□□□ 0.62
PTPN13-205ENST00000502971 ARHGAP5-AS1Q96IT6 56 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 Q96M66 194 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 OR10A4Q9H209 315 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 PQLC2LA1A4F0 135 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 ANGPTL7O43827 346 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 HTR3BO95264 441 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 IGKV3-15P01624 115 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 MRPS24Q96EL2 167 aaKnown RBP18.94■□□□□ 0.62
PTPN13-205ENST00000502971 IFT46Q9NQC8 304 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 KCNK7Q9Y2U2 307 aa18.94■□□□□ 0.62
PTPN13-205ENST00000502971 MAP1BP46821 2468 aaKnown RBP18.94■□□□□ 0.62
PTPN13-205ENST00000502971 ANKRD30BLA7E2S9 258 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 SSX5O60225 188 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 SMPD2O60906 423 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 FAM87AP0C7U9 286 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 BLVRBP30043 206 aaPredicted RBP18.93■□□□□ 0.62
PTPN13-205ENST00000502971 MECP2P51608 486 aaKnown RBP18.93■□□□□ 0.62
PTPN13-205ENST00000502971 MEF2DQ14814 521 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 ATAD3CQ5T2N8 411 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 FBXW12Q6X9E4 464 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 BHLHA15Q7RTS1 189 aaPredicted RBP18.93■□□□□ 0.62
PTPN13-205ENST00000502971 MYPOPQ86VE0 399 aaPredicted RBP18.93■□□□□ 0.62
PTPN13-205ENST00000502971 CISD2Q8N5K1 135 aaKnown RBP18.93■□□□□ 0.62
PTPN13-205ENST00000502971 GIMAP1Q8WWP7 306 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 SFXN3Q9BWM7 321 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 MPC1Q9Y5U8 109 aa18.93■□□□□ 0.62
PTPN13-205ENST00000502971 GTF3C1Q12789 2109 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 MYO7BQ6PIF6 2116 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 ARPC1BO15143 372 aaKnown RBP18.92■□□□□ 0.62
PTPN13-205ENST00000502971 CA11O75493 328 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 FCER2P06734 321 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 SFTPCP11686 197 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 CEACAM8P31997 349 aaPredicted RBP18.92■□□□□ 0.62
PTPN13-205ENST00000502971 CBX5P45973 191 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 NAXEQ8NCW5 288 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 OR5A2Q8NGI9 324 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 OR51S1Q8NGJ8 323 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 HIST1H2AAQ96QV6 131 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 OR51J1Q9H342 316 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 NPDC1Q9NQX5 325 aaPredicted RBP18.92■□□□□ 0.62
PTPN13-205ENST00000502971 ANAPC10Q9UM13 185 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 FLVCR2Q9UPI3 526 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 AMDHD2Q9Y303 409 aa18.92■□□□□ 0.62
PTPN13-205ENST00000502971 SERPINE3A8MV23 424 aa18.91■□□□□ 0.62
PTPN13-205ENST00000502971 AKR7A2O43488 359 aa18.91■□□□□ 0.62
PTPN13-205ENST00000502971 PLATP00750 562 aa18.91■□□□□ 0.62
PTPN13-205ENST00000502971 TBPP20226 339 aa18.91■□□□□ 0.62
PTPN13-205ENST00000502971 PPA1Q15181 289 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms