RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PLPP2O43688 288 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 CD1AP06126 327 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 CYB5R2Q6BCY4 276 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 GPR148Q8TDV2 347 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 LRRC29Q8WV35 223 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 AQP3Q92482 292 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 GHSRQ92847 366 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 RAB39BQ96DA2 213 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 OR5M11Q96RB7 305 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 PATZ1Q9HBE1 687 aaKnown RBP21.04■□□□□ 0.96
LSM6-202ENST00000502781 ZNF281Q9Y2X9 895 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 HIVEP2P31629 2446 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 FAM157AC9JC47 383 aa21.03■□□□□ 0.96
LSM6-202ENST00000502781 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.03■□□□□ 0.96
LSM6-202ENST00000502781 ZNF20P17024 532 aa21.03■□□□□ 0.96
LSM6-202ENST00000502781 EGR1P18146 543 aa21.03■□□□□ 0.96
LSM6-202ENST00000502781 SPHARQ15513 63 aa21.03■□□□□ 0.96
LSM6-202ENST00000502781 ZNF573Q86YE8 665 aa21.03■□□□□ 0.96
LSM6-202ENST00000502781 ZFP41Q8N8Y5 198 aa21.03■□□□□ 0.96
LSM6-202ENST00000502781 TMEM246Q9BRR3 403 aa21.03■□□□□ 0.96
LSM6-202ENST00000502781 SLC7A11Q9UPY5 501 aa21.03■□□□□ 0.96
LSM6-202ENST00000502781 DHDHQ9UQ10 334 aa21.03■□□□□ 0.96
LSM6-202ENST00000502781 F5H0A9 414 aaPredicted RBP21.02■□□□□ 0.96
LSM6-202ENST00000502781 ALX3O95076 343 aa21.02■□□□□ 0.96
LSM6-202ENST00000502781 MPZP25189 248 aa21.02■□□□□ 0.96
LSM6-202ENST00000502781 FUT6P51993 359 aa21.02■□□□□ 0.96
LSM6-202ENST00000502781 RPS11P62280 158 aaKnown RBP eCLIP21.02■□□□□ 0.96
LSM6-202ENST00000502781 CNN3Q15417 329 aaKnown RBP21.02■□□□□ 0.96
LSM6-202ENST00000502781 TEX36Q5VZQ5 186 aa21.02■□□□□ 0.96
LSM6-202ENST00000502781 HAGHLQ6PII5 290 aaPredicted RBP21.02■□□□□ 0.96
LSM6-202ENST00000502781 DNAAF1Q8NEP3 725 aa21.02■□□□□ 0.96
LSM6-202ENST00000502781 YTHDF1Q9BYJ9 559 aaKnown RBP21.02■□□□□ 0.96
LSM6-202ENST00000502781 IGKV1-27A0A075B6S5 117 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 TRBV5-5A0A0J9YX44 114 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 OOEPA6NGQ2 149 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 CEACAM18A8MTB9 384 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 TNFRSF13BO14836 293 aaPredicted RBP21.01■□□□□ 0.95
LSM6-202ENST00000502781 RHBDL1O75783 438 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 ATF1P18846 271 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 CPT2P23786 658 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 CD80P33681 288 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 HAAOP46952 286 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 GABARAPL2P60520 117 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 LINC01356Q8N9X3 169 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 C19orf18Q8NEA5 215 aa21.01■□□□□ 0.95
LSM6-202ENST00000502781 TSEN15Q8WW01 171 aaKnown RBP21.01■□□□□ 0.95
LSM6-202ENST00000502781 SONP18583 2426 aaKnown RBP21■□□□□ 0.95
LSM6-202ENST00000502781 B4DSR2 109 aa21■□□□□ 0.95
LSM6-202ENST00000502781 J3QT63 122 aa21■□□□□ 0.95
LSM6-202ENST00000502781 CELP19835 753 aa21■□□□□ 0.95
LSM6-202ENST00000502781 YIF1BQ5BJH7 314 aa21■□□□□ 0.95
LSM6-202ENST00000502781 SFRP4Q6FHJ7 346 aaPredicted RBP21■□□□□ 0.95
LSM6-202ENST00000502781 ASPHD2Q6ICH7 369 aa21■□□□□ 0.95
LSM6-202ENST00000502781 FAM90A1Q86YD7 464 aa21■□□□□ 0.95
LSM6-202ENST00000502781 SERPINA12Q8IW75 414 aa21■□□□□ 0.95
LSM6-202ENST00000502781 BOLLQ8N9W6 283 aaKnown RBP21■□□□□ 0.95
LSM6-202ENST00000502781 TRMT10AQ8TBZ6 339 aaKnown RBP21■□□□□ 0.95
LSM6-202ENST00000502781 NPRL2Q8WTW4 380 aa21■□□□□ 0.95
LSM6-202ENST00000502781 SPSB1Q96BD6 273 aa21■□□□□ 0.95
LSM6-202ENST00000502781 ZCCHC4Q9H5U6 513 aa21■□□□□ 0.95
LSM6-202ENST00000502781 MALRD1Q5VYJ5 2156 aa21■□□□□ 0.95
LSM6-202ENST00000502781 NSD1Q96L73 2696 aaPredicted RBP20.99■□□□□ 0.95
LSM6-202ENST00000502781 TRAV38-1A0A0B4J264 116 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 C3orf80F5H4A9 247 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 MRPS14O60783 128 aaKnown RBP20.99■□□□□ 0.95
LSM6-202ENST00000502781 WNT2P09544 360 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 ZNF16P17020 682 aaPredicted RBP20.99■□□□□ 0.95
LSM6-202ENST00000502781 PRKACBP22694 351 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 ZNF529Q6P280 563 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 DCDC5Q6ZRR9 648 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 CALHM1Q8IU99 346 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 DEFB108BQ8NET1 73 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 OR5D14Q8NGL3 314 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 OR13C5Q8NGS8 318 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 OR13C9Q8NGT0 318 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 ZNF671Q8TAW3 534 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 BORCS8Q96FH0 119 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 PKIBQ9C010 78 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 CCDC90BQ9GZT6 254 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 PCDHB10Q9UN67 800 aa20.99■□□□□ 0.95
LSM6-202ENST00000502781 FAM230AA0A1W2PPH8 454 aa20.98■□□□□ 0.95
LSM6-202ENST00000502781 AKR7A2O43488 359 aa20.98■□□□□ 0.95
LSM6-202ENST00000502781 SYNGR1O43759 233 aa20.98■□□□□ 0.95
LSM6-202ENST00000502781 NOS1APO75052 506 aaPredicted RBP20.98■□□□□ 0.95
LSM6-202ENST00000502781 CD2P06729 351 aa20.98■□□□□ 0.95
LSM6-202ENST00000502781 ACAA1P09110 424 aaPredicted RBP20.98■□□□□ 0.95
LSM6-202ENST00000502781 OCM2P0CE71 109 aa20.98■□□□□ 0.95
LSM6-202ENST00000502781 MUC1P15941 1255 aaPredicted RBP20.98■□□□□ 0.95
LSM6-202ENST00000502781 AZGP1P25311 298 aaKnown RBP20.98■□□□□ 0.95
LSM6-202ENST00000502781 TBCEQ15813 527 aaPredicted RBP20.98■□□□□ 0.95
LSM6-202ENST00000502781 KCNJ8Q15842 424 aa20.98■□□□□ 0.95
LSM6-202ENST00000502781 Q71RC1 249 aaPredicted RBP20.98■□□□□ 0.95
LSM6-202ENST00000502781 TMEM106AQ96A25 262 aa20.98■□□□□ 0.95
LSM6-202ENST00000502781 C12orf43Q96C57 262 aaKnown RBP20.98■□□□□ 0.95
LSM6-202ENST00000502781 WDR13Q9H1Z4 485 aa20.98■□□□□ 0.95
LSM6-202ENST00000502781 MIOXQ9UGB7 285 aa20.98■□□□□ 0.95
LSM6-202ENST00000502781 FN1P02751 2386 aaKnown RBP20.98■□□□□ 0.95
LSM6-202ENST00000502781 NDUFA2O43678 99 aa20.97■□□□□ 0.95
LSM6-202ENST00000502781 EEF1B2P24534 225 aaKnown RBP20.97■□□□□ 0.95
LSM6-202ENST00000502781 SOX2P48431 317 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms