RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 FCF1Q9Y324 198 aaKnown RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 C9orf170A2RU37 121 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 Q499Y3 187 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 ZNF296Q8WUU4 475 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 FAM198AQ9UFP1 575 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 SPTAN1Q13813 2472 aaKnown RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 OGG1O15527 345 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CBX2Q14781 532 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 APOBEC3FQ8IUX4 373 aaKnown RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 SLC25A11Q02978 314 aaKnown RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CTXN3Q4LDR2 81 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 NR2C2APQ86WQ0 139 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 TMEM140Q9NV12 185 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 APOBEC3BQ9UH17 382 aaKnown RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 IL4P05112 153 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CRYBA4P53673 196 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 PLPP7Q8NBV4 271 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 UBE2ZQ9H832 354 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 AP5S1Q9NUS5 200 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 APOMO95445 188 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 PPP1R3DO95685 299 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HRH1P35367 487 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 SUOXP51687 545 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 ANKRD34AQ69YU3 496 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 Q6ZSR9 355 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST3H2BBQ8N257 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 PQLC3Q8N755 202 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CLDN23Q96B33 292 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 MAGI1Q96QZ7 1491 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST1H2BKO60814 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST1H2BJP06899 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST1H2BOP23527 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST1H2BBP33778 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CAMPP49913 170 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST1H2BDP58876 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST1H2BCP62807 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST2H2BEQ16778 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 VSTM2AQ8TAG5 236 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST1H2BHQ93079 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST1H2BNQ99877 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HIST1H2BMQ99879 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 AHRRA9YTQ3 701 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CDX2Q99626 313 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HES7Q9BYE0 225 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 PBX4Q9BYU1 374 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 SMOC1Q9H4F8 434 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HOXA6P31267 233 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 PPP1CAP62136 330 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 SLC25A35Q3KQZ1 300 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 UNQ5815/PRO19632Q6UWF5 114 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 GYPAP02724 150 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 AGAP20933 346 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CTSOP43234 321 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 PAFAH1B3Q15102 231 aaKnown RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 TRAT1Q6PIZ9 186 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CALHM1Q8IU99 346 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 YDJCA8MPS7 323 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CEACAM1P13688 526 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 C1QL4Q86Z23 238 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 ACOT4Q8N9L9 421 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 LCORQ96JN0 433 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 NECAP2Q9NVZ3 263 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 ELOVL2Q9NXB9 296 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 V9GYH0 126 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 MELKQ14680 651 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 MFSD12Q6NUT3 480 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 FAAP20Q6NZ36 180 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 INSIG2Q9Y5U4 225 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 SCN2AQ99250 2005 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 KCNE1BA0A087WTH5 132 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 MYADML2A6NDP7 307 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 HOXC4P09017 264 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 GDF1P27539 372 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 USP22Q9UPT9 525 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 TRACP01848 142 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 MPZP25189 248 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 BLVRBP30043 206 aaPredicted RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 C20orf196Q8IYI0 205 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 KCNK15Q9H427 330 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 SPG21Q9NZD8 308 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 DTX4Q9Y2E6 619 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 NKX2-6A6NCS4 301 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 PI3P19957 117 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 RPS20P60866 119 aaKnown RBP4.3□□□□□ -1.72
NEAT1-202ENST00000501122 SPANXN5Q5MJ07 72 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 C7orf66A4D0T2 115 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 GABARAPL1Q9H0R8 117 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 VDAC3Q9Y277 283 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 MED12LQ86YW9 2145 aa4.3□□□□□ -1.72
NEAT1-202ENST00000501122 CTDSPLO15194 276 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MMP25Q9NPA2 562 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 THYN1Q9P016 225 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 FITM1A5D6W6 292 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 WASP42768 502 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MVDP53602 400 aa4.29□□□□□ -1.72
NEAT1-202ENST00000501122 MEF2CQ06413 473 aaPredicted RBP4.29□□□□□ -1.72
NEAT1-202ENST00000501122 SLC22A24Q8N4F4 322 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms