RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, human

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMPCB-208	ENST00000498530	CCDC122	Q5T0U0	273 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	RESP18	Q5W5W9	173 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	STEAP4	Q687X5	459 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	SETD3	Q86TU7	594 aa	Predicted RBP	4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	FAM9C	Q8IZT9	166 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	SPAG16	Q8N0X2	631 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	LINC00612	Q8N6U2	182 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	LINC01555	Q8NAE3	123 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	C19orf18	Q8NEA5	215 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	OR10G6	Q8NH81	332 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	BLOC1S5	Q8TDH9	187 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	CATSPER2	Q96P56	530 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	PYGO2	Q9BRQ0	406 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	HDHD2	Q9H0R4	259 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	EDA2R	Q9HAV5	297 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	ACOT13	Q9NPJ3	140 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	VAX2	Q9UIW0	290 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	TFR2	Q9UP52	801 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	URGCP-MRPS24	S4R325	110 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	WNK3	Q9BYP7	1800 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	ASTN1	O14525	1302 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	CEP290	O15078	2479 aa		4.15	□□□□□ -1.75
PMPCB-208	ENST00000498530	LRPPRC	P42704	1394 aa	Known RBP	4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	CCDC88A	Q3V6T2	1871 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	NKX2-6	A6NCS4	301 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	CLDN34	H7C241	214 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	DNASE2	O00115	360 aa	Predicted RBP	4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	CD5L	O43866	347 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	RP2	O75695	350 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	LY6G6D	O95868	133 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	GP1BA	P07359	652 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	SYT1	P21579	422 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	TEAD1	P28347	426 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	UGT2B10	P36537	528 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	RPS9	P46781	194 aa	Known RBP	4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	GALR1	P47211	349 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	ZNF136	P52737	540 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	SKP1	P63208	163 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	IRF4	Q15306	451 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	DNAJC24	Q6P3W2	148 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	CYP4Z1	Q86W10	505 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	LRRC52	Q8N7C0	313 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	RDH5	Q92781	318 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	TAAR1	Q96RJ0	339 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	C20orf144	Q9BQM9	153 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	SAMD10	Q9BYL1	202 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	COA1	Q9GZY4	146 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	SPNS1	Q9H2V7	528 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	ZNF442	Q9H7R0	627 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	METTL8	Q9H825	291 aa	Known RBP	4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	NANOG	Q9H9S0	305 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	SLC7A11	Q9UPY5	501 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	ATP6V1D	Q9Y5K8	247 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	KIF25-AS1	Q9Y6Z4	181 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	CACNA1G	O43497	2377 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	COL14A1	Q05707	1796 aa	Known RBP	4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	HTT	P42858	3142 aa		4.14	□□□□□ -1.75
PMPCB-208	ENST00000498530	IGKV1-8	A0A0C4DH67	115 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	IGHV3-64D	A0A0J9YX35	117 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	ZNF233	A6NK53	670 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530		F8VZ95	297 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	LAD1	O00515	517 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	SGCE	O43556	437 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	PTTG1	O95997	202 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	CXCR1	P25024	350 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	OR12D2	P58182	307 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	UBE2K	P61086	200 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	ARG2	P78540	354 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	GUSBP1	Q15486	140 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	TOMM34	Q15785	309 aa	Predicted RBP	4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	ORMDL2	Q53FV1	153 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	TFDP3	Q5H9I0	405 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	TCEAL5	Q5H9L2	206 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	KRTAP5-1	Q6L8H4	278 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	AHSA2	Q719I0	299 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	NKAIN4	Q8IVV8	208 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	NELFCD	Q8IXH7	590 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	TCEAL3	Q969E4	200 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	CEP170P1	Q96L14	293 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	TMEM27	Q9HBJ8	222 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	ZFHX4	Q86UP3	3567 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	MN1	Q10571	1320 aa	Predicted RBP	4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	TMEM131	Q92545	1883 aa		4.13	□□□□□ -1.75
PMPCB-208	ENST00000498530	ZNF318	Q5VUA4	2279 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	ITSN1	Q15811	1721 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	PKD1L2	Q7Z442	2459 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	IGLV11-55	A0A075B6I3	123 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	TRAV8-4	A0A0B4J246	113 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	FAM240A	A0A1B0GVK7	77 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	ERI2	A8K979	691 aa	Known RBP	4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	INS-IGF2	F8WCM5	200 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	GOLGA8R	I6L899	631 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	TAAR5	O14804	337 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	GABARAP	O95166	117 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530	ACTL6A	O96019	429 aa		4.12	□□□□□ -1.75
PMPCB-208	ENST00000498530		P01737	135 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms