RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	MAGEB1	P43366	347 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PTH2R	P49190	550 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ELL	P55199	621 aa	Predicted RBP	4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR10A3	P58181	314 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RAB1A	P62820	205 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PITPNA	Q00169	270 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PSG4	Q00888	419 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	IL18	Q14116	193 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SLC25A35	Q3KQZ1	300 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ACSF3	Q4G176	576 aa	Predicted RBP	4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PABPC1L2A	Q5JQF8	200 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C1orf185	Q5T7R7	199 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	HES5	Q5TA89	166 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	NSUN5P2	Q63ZY6	315 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PYHIN1	Q6K0P9	492 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF774	Q6NX45	483 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PLXDC2	Q6UX71	529 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LRRTM1	Q86UE6	522 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LYSMD2	Q8IV50	215 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CDH26	Q8IXH8	852 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CMTM4	Q8IZR5	234 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR8H2	Q8N162	312 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	NKAIN3	Q8N8D7	197 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SAMD12	Q8N8I0	201 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR8B12	Q8NGG6	310 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR51A4	Q8NGJ6	313 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR1K1	Q8NGR3	316 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	AKR7L	Q8NHP1	331 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR51E1	Q8TCB6	317 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C15orf40	Q8WUR7	153 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RAB40A	Q8WXH6	277 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	S100A16	Q96FQ6	103 aa	Known RBP	4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZFP3	Q96NJ6	502 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RGCC	Q9H4X1	137 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PLEKHA1	Q9HB21	404 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ABCB10	Q9NRK6	738 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PLSCR4	Q9NRQ2	329 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RNF7	Q9UBF6	113 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	EXTL2	Q9UBQ6	330 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MALT1	Q9UDY8	824 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	STEAP1	Q9UHE8	339 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PRSS50	Q9UI38	385 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OSGIN2	Q9Y236	505 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ETV7	Q9Y603	341 aa		4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TNRC6A	Q8NDV7	1962 aa	Known RBP	4.58	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ACAN	P16112	2415 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TRAV8-7	A0A075B6U6	113 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LOC390937	A0A1W2PQ73	354 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MBD3L3	A6NE82	208 aa	Predicted RBP	4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	DHRS7C	A6NNS2	312 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SLC17A2	O00624	439 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	XRCC2	O43543	280 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SULT1B1	O43704	296 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	DHRS3	O75911	302 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TPPP	O94811	219 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ALDOB	P05062	364 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SERPINA5	P05154	406 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MMP7	P09237	267 aa	Predicted RBP	4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PATE4	P0C8F1	98 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CD37	P11049	281 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SLC2A1	P11166	492 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CD79A	P11912	226 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ABO	P16442	354 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ADRA2C	P18825	462 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ELK1	P19419	428 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CRYGS	P22914	178 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	HTR2C	P28335	458 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	APLNR	P35414	380 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	THBS4	P35443	961 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TIMP3	P35625	211 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	NR4A2	P43354	598 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PITPNB	P48739	271 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	INPP1	P49441	399 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	UBE2N	P61088	152 aa	Known RBP	4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	IFITM3	Q01628	133 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RBPJ	Q06330	500 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SCN1B	Q07699	218 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MALL	Q13021	153 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RAB11B	Q15907	218 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GSG1	Q2KHT4	349 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GFOD2	Q3B7J2	385 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PYDC2	Q56P42	97 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	UBE2NL	Q5JXB2	153 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C9orf135	Q5VTT2	229 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	AGAP6	Q5VW22	663 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	HACD4	Q5VWC8	232 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CNIH2	Q6PI25	160 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325		Q6ZSR3	168 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325		Q6ZT83	130 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PRSS45	Q7RTY3	260 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	NAA40	Q86UY6	237 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	NR2C2AP	Q86WQ0	139 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CNEP1R1	Q8N9A8	125 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	POC5	Q8NA72	575 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C19orf18	Q8NEA5	215 aa		4.57	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.57	□□□□□ -1.68

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