RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ZBTB44Q8NCP5 570 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 MORN4Q8NDC4 146 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 BPIFB6Q8NFQ5 453 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR10H4Q8NGA5 316 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR4F15Q8NGB8 312 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR4K14Q8NGD5 310 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR8J2Q8NGG1 315 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR9Q1Q8NGQ5 310 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR13C2Q8NGS9 318 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR2T29Q8NH02 315 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR52P1PQ8NH57 321 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR51A7Q8NH64 312 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 GPR151Q8TDV0 419 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 PHF10Q8WUB8 498 aaKnown RBP1.92□□□□□ -2.1
RIF1-212ENST00000498041 CT55Q8WUE5 264 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 RNF138Q8WVD3 245 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 OR5P2Q8WZ92 322 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 PSMF1Q92530 271 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 MARC2Q969Z3 335 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 ADIPOR1Q96A54 375 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 TMEM186Q96B77 213 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 ASB9Q96DX5 294 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 NEURL3Q96EH8 262 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 ZNF285Q96NJ3 590 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 AMELYQ99218 206 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 ZBTB18Q99592 522 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 TBX5Q99593 518 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 MCHR1Q99705 422 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 ARHGDIGQ99819 225 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 CCT7Q99832 543 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 HOPXQ9BPY8 73 aaPredicted RBP1.92□□□□□ -2.1
RIF1-212ENST00000498041 EFCAB11Q9BUY7 163 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 YIPF3Q9GZM5 350 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 TMEM185BQ9H7F4 350 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 TRIM45Q9H8W5 580 aaPredicted RBP1.92□□□□□ -2.1
RIF1-212ENST00000498041 NMNAT1Q9HAN9 279 aaPredicted RBP1.92□□□□□ -2.1
RIF1-212ENST00000498041 GID8Q9NWU2 228 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 THUMPD1Q9NXG2 353 aaKnown RBP1.92□□□□□ -2.1
RIF1-212ENST00000498041 CNOT2Q9NZN8 540 aaKnown RBP1.92□□□□□ -2.1
RIF1-212ENST00000498041 PRPF19Q9UMS4 504 aaKnown RBP1.92□□□□□ -2.1
RIF1-212ENST00000498041 GMPPBQ9Y5P6 360 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 SPACA6W5XKT8 324 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 RTTNQ86VV8 2226 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 ZNF292O60281 2723 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 USP34Q70CQ2 3546 aa1.92□□□□□ -2.1
RIF1-212ENST00000498041 TRIOO75962 3097 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 TRAV27A0A087WT01 109 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 IGKV3D-11A0A0A0MRZ8 115 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 C15orf38-AP3S2A0A0A6YYH1 394 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 TRBV11-1A0A0K0K1C0 115 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 SAGE2PA6NJ88 616 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 G3V2T6 193 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 GNGT2O14610 69 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 CASKO14936 926 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 PFDN6O15212 129 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 DENRO43583 198 aaKnown RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 SSX5O60225 188 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 CTNSO60931 367 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 ICOSLGO75144 302 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 ENTPD6O75354 484 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 TRIM3O75382 744 aaPredicted RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 KLF7O75840 302 aaPredicted RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 UTS2O95399 124 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 LDOC1O95751 146 aaPredicted RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 LGI1O95970 557 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 PTHP01270 115 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 TFF1P04155 84 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 CD55P08174 381 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 PABPC4LP0CB38 370 aaKnown RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 CCL3P10147 92 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 OTX2P32243 289 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 RORAP35398 523 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 RPL4P36578 427 aaKnown RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 AQP2P41181 271 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 RPS9P46781 194 aaKnown RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 CAPZBP47756 277 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 OMPP47874 163 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 ETV1P50549 477 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 ZNF133P52736 654 aaPredicted RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 SUCLG1P53597 346 aaKnown RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 KRTAP10-1P60331 282 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 RND3P61587 244 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 NCS1P62166 190 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 ERVK-25P63136 954 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 IFITM3Q01628 133 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 CHRNB3Q05901 458 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 MERTKQ12866 999 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 PSG7Q13046 419 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 ZNF154Q13106 437 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 APOFQ13790 326 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 GINS1Q14691 196 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 ARHGAP19Q14CB8 494 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 PTGES3Q15185 160 aaKnown RBP1.91□□□□□ -2.1
RIF1-212ENST00000498041 OR1Q1Q15612 314 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 TSC22D1Q15714 1073 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 CEBPEQ15744 281 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 ARHGAP11BQ3KRB8 267 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 SPIN4Q56A73 249 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 ZNF311Q5JNZ3 666 aa1.91□□□□□ -2.1
RIF1-212ENST00000498041 MRPL2Q5T653 305 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms