RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 PRDX4Q13162 271 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 TBC1D28Q2M2D7 210 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 CALHM1Q8IU99 346 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 CISD2Q8N5K1 135 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 OR51S1Q8NGJ8 323 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 CPNE2Q96FN4 548 aaPredicted RBP11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 BEX2Q9BXY8 128 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 ACTR6Q9GZN1 396 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 BEX1Q9HBH7 125 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 NEK6Q9HC98 313 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 ZNF107Q9UII5 783 aaPredicted RBP11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 PQLC2LA1A4F0 135 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 FIGNL2A6NMB9 653 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 M0QYG6 137 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 ICMTO60725 284 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 PEX14O75381 377 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 CYB5AP00167 134 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 CD74P04233 296 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 GSTP1P09211 210 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 ATP1B3P54709 279 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 RRAS2P62070 204 aaPredicted RBP11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 PDZK1IP1Q13113 114 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 FAM189A2Q15884 450 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 SPATA46Q5T0L3 261 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 ZNF782Q6ZMW2 699 aaPredicted RBP11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 STEAP2Q8NFT2 490 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 GIMAP1Q8WWP7 306 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 Q96M66 194 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 FYTTD1Q96QD9 318 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 C1QTNF6Q9BXI9 259 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 TINAGL1Q9GZM7 467 aaPredicted RBP11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 METTL9Q9H1A3 318 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 TP63Q9H3D4 680 aaPredicted RBP11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 OPA3Q9H6K4 179 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 ARPC1BO15143 372 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 SMPD2O60906 423 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 AGFG2O95081 481 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 IGKV3-15P01624 115 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 CRHP06850 196 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 FAM87AP0C7U9 286 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 ZNF735P0CB33 412 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 CBR1P16152 277 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 RCVRNP35243 200 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 TIMP3P35625 211 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 RSU1Q15404 277 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 CSNK2A3Q8NEV1 391 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 BEST4Q8NFU0 473 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 ZNF581Q9P0T4 197 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 ZNF221Q9UK13 617 aa11.76□□□□□ -0.53
SPTBN1-205ENST00000496323 ZNF736B4DX44 427 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 HTR3BO95264 441 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 RAB3DO95716 219 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 SFTPBP07988 381 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 CPT2P23786 658 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 IL32P24001 234 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 BLVRBP30043 206 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 TMPRSS3P57727 454 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 CD83Q01151 205 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 P2RY6Q15077 328 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 ST3GAL2Q16842 350 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 CEACAM21Q3KPI0 293 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 OR52W1Q6IF63 320 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 BHLHE23Q8NDY6 225 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 PXT1Q8NFP0 134 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 OR5L1Q8NGL2 311 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 ST8SIA4Q92187 359 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 OR51J1Q9H342 316 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 CACNA1GO43497 2377 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 PYCARD-AS1I3L0S3 204 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 IL2RAP01589 272 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 HPXP02790 462 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 NKX2-5P52952 324 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 GNG2P59768 71 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 ERVS71-1P61550 626 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 SIGIRRQ6IA17 410 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 ZNF474Q6S9Z5 364 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 ZDHHC23Q8IYP9 409 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 DMRTB1Q96MA1 342 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 PECRQ9BY49 303 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 IL36GQ9NZH8 169 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 ANAPC10Q9UM13 185 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 ACACAQ13085 2346 aa11.75□□□□□ -0.53
SPTBN1-205ENST00000496323 J3QW42 95 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 ANXA7P20073 488 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 GABRR1P24046 479 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 CEACAM8P31997 349 aaPredicted RBP11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 RAD52P43351 418 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 MECP2P51608 486 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 GPM6AP51674 278 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 CBX3Q13185 183 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 RBMS2Q15434 407 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 PNLIPRP3Q17RR3 467 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 OR2T2Q6IF00 324 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 ZNF611Q8N823 705 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 OR51F2Q8NH61 342 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 SNAPC3Q92966 411 aa11.74□□□□□ -0.53
SPTBN1-205ENST00000496323 SLX1AQ9BQ83 275 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms