RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZNF556Q9HAH1 456 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 ELL3Q9HB65 397 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-208ENST00000494780 RASL12Q9NYN1 266 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 OR5B21A6NL26 309 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 H3BUX3 64 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 CSF1P09603 554 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 CALB2P22676 271 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 SLC2A5P22732 501 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 CEP78Q5JTW2 689 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 KCTD18Q6PI47 426 aaPredicted RBP18.95■□□□□ 0.62
COL27A1-208ENST00000494780 TRPM8Q7Z2W7 1104 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 FAM185AQ8N0U4 392 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 BBS1Q8NFJ9 593 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 AQP3Q92482 292 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 CCDC124Q96CT7 223 aaKnown RBP18.95■□□□□ 0.62
COL27A1-208ENST00000494780 SSX3Q99909 188 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 YIPF3Q9GZM5 350 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 FAM206AQ9NX38 181 aa18.95■□□□□ 0.62
COL27A1-208ENST00000494780 HOXB6P17509 224 aaKnown RBP18.94■□□□□ 0.62
COL27A1-208ENST00000494780 HERPUD1Q15011 391 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 AANATQ16613 207 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 ZBTB37Q5TC79 503 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 C11orf88Q6PI97 169 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 THAP5Q7Z6K1 395 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 OR51G2Q8NGK0 314 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 TEX12Q9BXU0 123 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 MROQ9BYG7 248 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 MEGF9Q9H1U4 602 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 YY1AP1Q9H869 796 aa18.94■□□□□ 0.62
COL27A1-208ENST00000494780 TMEM269A0A1B0GVZ9 245 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 AQP12BA6NM10 295 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 ANGPTL7O43827 346 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 MTRF1O75570 445 aaKnown RBP18.93■□□□□ 0.62
COL27A1-208ENST00000494780 HCCSP53701 268 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 RIPPLY1Q0D2K3 151 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 Q6ZTK2 550 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 MOB3CQ70IA8 216 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 C1QL4Q86Z23 238 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 AQP12AQ8IXF9 295 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 C17orf50Q8WW18 174 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 PBOV1Q9GZY1 135 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 SLC25A19Q9HC21 320 aa18.93■□□□□ 0.62
COL27A1-208ENST00000494780 PRKDCP78527 4128 aaKnown RBP18.93■□□□□ 0.62
COL27A1-208ENST00000494780 TET2Q6N021 2002 aaPredicted RBP18.92■□□□□ 0.62
COL27A1-208ENST00000494780 GSC2O15499 205 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 ZNF254O75437 659 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 E2F6O75461 281 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 IGLV3-1P01715 115 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 ANXA8P13928 327 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 KIR2DS4P43632 304 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 CAPZA1P52907 286 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 APOFQ13790 326 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 LRRC75BQ2VPJ9 315 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 PLCXD3Q63HM9 321 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 HAGHLQ6PII5 290 aaPredicted RBP18.92■□□□□ 0.62
COL27A1-208ENST00000494780 ACP7Q6ZNF0 438 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 COMMD2Q86X83 199 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 OR4C13Q8NGP0 309 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 OR5K1Q8NHB7 308 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 PPP1R35Q8TAP8 253 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 CANT1Q8WVQ1 401 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 AJUBAQ96IF1 538 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 RAB18Q9NP72 206 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 C19orf12Q9NSK7 152 aa18.92■□□□□ 0.62
COL27A1-208ENST00000494780 A0A1W2PPH5 198 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 T-ENOLP0DO92 83 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 EFNB2P52799 333 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 ROM1Q03395 351 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 LY6EQ16553 131 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 SMIM21Q3B7S5 101 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 MKXQ8IYA7 352 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 HS3ST5Q8IZT8 346 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 POC1AQ8NBT0 407 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 OR51E1Q8TCB6 317 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 ASB17Q8WXJ9 295 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 RORBQ92753 470 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 CLPTM1LQ96KA5 538 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 TEAD3Q99594 435 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 C1orf21Q9H246 121 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 RANBP3Q9H6Z4 567 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-208ENST00000494780 HEXA-AS1Q9H8Q6 139 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 GPR84Q9NQS5 396 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 ENPP5Q9UJA9 477 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 PIGLQ9Y2B2 252 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 SIGLEC9Q9Y336 463 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 TMEM14AQ9Y6G1 99 aa18.91■□□□□ 0.62
COL27A1-208ENST00000494780 RFPL4AA6NLU0 287 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 RFPL4AL1F8VTS6 287 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 PSMD9O00233 223 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 FAHP16930 419 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 PRKACGP22612 351 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 ZNF829Q3KNS6 432 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-208ENST00000494780 DMRTC1Q5HYR2 192 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 LCN1P1Q5VSP4 162 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 TMEM236Q5W0B7 351 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 ZNF679Q8IYX0 411 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 ZNF561Q8N587 486 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 CD177Q8N6Q3 437 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 OR8B4Q96RC9 309 aa18.9■□□□□ 0.62
COL27A1-208ENST00000494780 NUFIP1Q9UHK0 495 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms