RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 EFNA2O43921 213 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 SLC34A2O95436 690 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 CTSDP07339 412 aaPredicted RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 GPX4P36969 197 aaPredicted RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 OR51T1Q8NGJ9 327 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 OR14K1Q8NGZ2 314 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 BADQ92934 168 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 CHST5Q9GZS9 411 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 EIF5A2Q9GZV4 153 aaKnown RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 TOLLIPQ9H0E2 274 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 MED19A0JLT2 244 aaPredicted RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 C2orf72A6NCS6 295 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 ZNF878C9JN71 531 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 HCKP08631 526 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 ZNF43P17038 809 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 RBMXP38159 391 aaKnown RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 C9orf152Q5JTZ5 239 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 SP5Q6BEB4 398 aaPredicted RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 WDSUB1Q8N9V3 476 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 APCDD1LQ8NCL9 501 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 MARS2Q96GW9 593 aaKnown RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 FAM71F1Q96KD3 344 aaPredicted RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 LYZL4Q96KX0 146 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 TM2D1Q9BX74 207 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 PPP4R1LQ9P1A2 415 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 PISDQ9UG56 409 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 C14orf166Q9Y224 244 aaKnown RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 IGLV3-1P01715 115 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 KLK3P07288 261 aaPredicted RBP13.46□□□□□ -0.25
SDF4-207ENST00000494748 NME1P15531 152 aaKnown RBP13.46□□□□□ -0.25
SDF4-207ENST00000494748 CDAP32320 146 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 TLE3Q04726 772 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 LCN10Q6JVE6 187 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 OR5D18Q8NGL1 313 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 NUDT22Q9BRQ3 303 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.25
SDF4-207ENST00000494748 LRRC61Q9BV99 259 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 TREM2Q9NZC2 230 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 FBXO7Q9Y3I1 522 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 K7N7A8 449 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 WRBO00258 174 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 FOSL2P15408 326 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 ZNF565Q8N9K5 539 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 OR10H5Q8NGA6 315 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 RARRES2Q99969 163 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 ZNF2Q9BSG1 426 aaPredicted RBP13.46□□□□□ -0.25
SDF4-207ENST00000494748 HDHD3Q9BSH5 251 aaPredicted RBP13.46□□□□□ -0.25
SDF4-207ENST00000494748 SERINC1Q9NRX5 453 aa13.46□□□□□ -0.25
SDF4-207ENST00000494748 RTTNQ86VV8 2226 aa13.46□□□□□ -0.26
SDF4-207ENST00000494748 A0A1W2PNV4 684 aa13.46□□□□□ -0.26
SDF4-207ENST00000494748 LIPT2A6NK58 231 aa13.46□□□□□ -0.26
SDF4-207ENST00000494748 RAMP1O60894 148 aa13.46□□□□□ -0.26
SDF4-207ENST00000494748 BLVRBP30043 206 aaPredicted RBP13.46□□□□□ -0.26
SDF4-207ENST00000494748 C16orf47Q6ZP98 133 aaPredicted RBP13.46□□□□□ -0.26
SDF4-207ENST00000494748 SLC16A14Q7RTX9 510 aa13.46□□□□□ -0.26
SDF4-207ENST00000494748 OR1N1Q8NGS0 311 aa13.46□□□□□ -0.26
SDF4-207ENST00000494748 MR1Q95460 341 aa13.46□□□□□ -0.26
SDF4-207ENST00000494748 LUZP4Q9P127 313 aa13.46□□□□□ -0.26
SDF4-207ENST00000494748 ADAMTS20P59510 1910 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 PGA4P0DJD7 388 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 PGA3P0DJD8 388 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 CDX1P47902 265 aaPredicted RBP13.45□□□□□ -0.26
SDF4-207ENST00000494748 TMEM187Q14656 261 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 KISS1Q15726 138 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 WDR77Q9BQA1 342 aaPredicted RBP13.45□□□□□ -0.26
SDF4-207ENST00000494748 RFNGQ9Y644 331 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 SHISA8B8ZZ34 492 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 E5RGE8 158 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 OR13C7P0DN81 318 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 CAMLGP49069 296 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 RAB5CP51148 216 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 RAB1AP62820 205 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 CLINT1Q14677 625 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 CHRFAM7AQ494W8 412 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 TTLL10Q6ZVT0 673 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 GALNTL5Q7Z4T8 443 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 LIN37Q96GY3 246 aaPredicted RBP13.45□□□□□ -0.26
SDF4-207ENST00000494748 PRDM13Q9H4Q3 707 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 NSG2Q9Y328 171 aa13.45□□□□□ -0.26
SDF4-207ENST00000494748 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 ANKUB1A6NFN9 424 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 RER1O15258 196 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 CA11O75493 328 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 SERPINE3A8MV23 424 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 GPR137BO60478 399 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 SCGB1D2O95969 90 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 CCL20P78556 96 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 HIST2H3AQ71DI3 136 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 SULF2Q8IWU5 870 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 SGPP2Q8IWX5 399 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 CHRDQ9H2X0 955 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 C11orf1Q9H5F2 150 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 HSF4Q9ULV5 492 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 XRCC2O43543 280 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 OR2C1O95371 312 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 CTHP32929 405 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 HLA-DQA1Q5Y7H0 255 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 C6orf201Q7Z4U5 140 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 COMMD2Q86X83 199 aa13.44□□□□□ -0.26
SDF4-207ENST00000494748 LRRC18Q8N456 261 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms