RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GATBO75879 557 aaKnown RBP11.33□□□□□ -0.6
COL1A1-208ENST00000494334 RPSAP08865 295 aaKnown RBP11.33□□□□□ -0.6
COL1A1-208ENST00000494334 WNT2P09544 360 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 ZNF20P17024 532 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 HAAOP46952 286 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 TEX36Q5VZQ5 186 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 DMKNQ6E0U4 476 aaPredicted RBP11.33□□□□□ -0.6
COL1A1-208ENST00000494334 FAM166AQ6J272 317 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 HAGHLQ6PII5 290 aaPredicted RBP11.33□□□□□ -0.6
COL1A1-208ENST00000494334 ZFP41Q8N8Y5 198 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 OR13C3Q8NGS6 347 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 TRMT10AQ8TBZ6 339 aaKnown RBP11.33□□□□□ -0.6
COL1A1-208ENST00000494334 NPRL2Q8WTW4 380 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 AQP3Q92482 292 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 RGP1Q92546 391 aaPredicted RBP11.33□□□□□ -0.6
COL1A1-208ENST00000494334 SMIM19Q96E16 107 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 SEH1LQ96EE3 360 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 SLC7A11Q9UPY5 501 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 TRAV38-1A0A0B4J264 116 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 IGKV1-9A0A0C4DH69 117 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 FAM230AA0A1W2PPH8 454 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 INAFM1C9JVW0 142 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-208ENST00000494334 AKR7A2O43488 359 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 PLPP2O43688 288 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 MSMBP08118 114 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 ATF1P18846 271 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 FUT6P51993 359 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 SEC61A1P61619 476 aaKnown RBP11.32□□□□□ -0.6
COL1A1-208ENST00000494334 IRF3Q14653 427 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 RBM48Q5RL73 367 aaKnown RBP11.32□□□□□ -0.6
COL1A1-208ENST00000494334 LYPD2Q6UXB3 125 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 DCDC5Q6ZRR9 648 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 UTS2BQ765I0 119 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 ZNF573Q86YE8 665 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 ZNF671Q8TAW3 534 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 GHSRQ92847 366 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 PGLYRP3Q96LB9 341 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 TECTBQ96PL2 329 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 WDR13Q9H1Z4 485 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 Q9H521 79 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 MIOXQ9UGB7 285 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 KCNS2Q9ULS6 477 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 DHDHQ9UQ10 334 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 ZNF281Q9Y2X9 895 aa11.32□□□□□ -0.6
COL1A1-208ENST00000494334 MTORP42345 2549 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 IGHV3OR15-7A0A075B7D8 119 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 RGS10O43665 173 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 SYNGR1O43759 233 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 GYPAP02724 150 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 MT-ND2P03891 347 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 RPS2P15880 293 aaKnown RBP11.31□□□□□ -0.6
COL1A1-208ENST00000494334 MUC1P15941 1255 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-208ENST00000494334 CPT2P23786 658 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 ZFP36P26651 326 aaKnown RBP11.31□□□□□ -0.6
COL1A1-208ENST00000494334 DVL1P1P54792 670 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-208ENST00000494334 TAS2R43P59537 309 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 GMFBP60983 142 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 CNN3Q15417 329 aaKnown RBP11.31□□□□□ -0.6
COL1A1-208ENST00000494334 KCNJ8Q15842 424 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 MICBQ29980 383 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 ANGPTL5Q86XS5 388 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 FAM90A1Q86YD7 464 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 CALHM1Q8IU99 346 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 SERPINA12Q8IW75 414 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 PARP16Q8N5Y8 322 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 DNAAF1Q8NEP3 725 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 OR51F2Q8NH61 342 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 GPR148Q8TDV2 347 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 TSEN15Q8WW01 171 aaKnown RBP11.31□□□□□ -0.6
COL1A1-208ENST00000494334 TMEM186Q96B77 213 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 BORCS8Q96FH0 119 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 OR5M11Q96RB7 305 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 MND1Q9BWT6 205 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 RASSF4Q9H2L5 321 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 ZCCHC4Q9H5U6 513 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 LSM2Q9Y333 95 aaKnown RBP11.31□□□□□ -0.6
COL1A1-208ENST00000494334 SVEP1Q4LDE5 3571 aa11.31□□□□□ -0.6
COL1A1-208ENST00000494334 ZANQ9Y493 2812 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 PNMA8CA0A1B0GUJ8 204 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 J3QT63 122 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 NDUFA2O43678 99 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 CD1AP06126 327 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 CELP19835 753 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 GLRA1P23415 457 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 MPZP25189 248 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 AZGP1P25311 298 aaKnown RBP11.3□□□□□ -0.6
COL1A1-208ENST00000494334 SOX2P48431 317 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 RBP2P50120 134 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL1A1-208ENST00000494334 BDH1Q02338 343 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 ACSM1Q08AH1 577 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 SPHARQ15513 63 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 ZNF841Q6ZN19 808 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 PRSS48Q7RTY5 328 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 GLCCI1Q86VQ1 547 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 OR5D14Q8NGL3 314 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 OR13C5Q8NGS8 318 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 OR13C9Q8NGT0 318 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms