RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 RAB1AP62820 205 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 GK2Q14410 553 aaPredicted RBP9.2□□□□□ -0.94
CLCN6-208ENST00000494028 NKPD1Q17RQ9 610 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 ACTBL2Q562R1 376 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 Q5BKY6 102 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 LAMTOR1Q6IAA8 161 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 IGFL3Q6UXB1 125 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 NCCRP1Q6ZVX7 275 aaPredicted RBP9.2□□□□□ -0.94
CLCN6-208ENST00000494028 MOB3CQ70IA8 216 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 MRPL21Q7Z2W9 205 aaKnown RBP9.2□□□□□ -0.94
CLCN6-208ENST00000494028 MDP1Q86V88 176 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 GCNT2Q8N0V5 402 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 SPICQ8N5J4 248 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 OR51T1Q8NGJ9 327 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 HPSE2Q8WWQ2 592 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 SLC25A21Q9BQT8 299 aaPredicted RBP9.2□□□□□ -0.94
CLCN6-208ENST00000494028 ZNF436Q9C0F3 470 aaPredicted RBP9.2□□□□□ -0.94
CLCN6-208ENST00000494028 METTL9Q9H1A3 318 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 OPA3Q9H6K4 179 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 MYOZ1Q9NP98 299 aaPredicted RBP9.2□□□□□ -0.94
CLCN6-208ENST00000494028 VSIG4Q9Y279 399 aa9.2□□□□□ -0.94
CLCN6-208ENST00000494028 PQLC2LA1A4F0 135 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 FIGNL2A6NMB9 653 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 SERPINA5P05154 406 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 GIPP09681 153 aaPredicted RBP9.19□□□□□ -0.94
CLCN6-208ENST00000494028 TMEM225BP0DP42 221 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 CBX5P45973 191 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 RBP2P50120 134 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 PLP2Q04941 152 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 PRDX4Q13162 271 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 SF3B4Q15427 424 aaKnown RBP eCLIP9.19□□□□□ -0.949e-15■■■■□ 19.5
CLCN6-208ENST00000494028 MICBQ29980 383 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 VAX1Q5SQQ9 334 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 C17orf107Q6ZR85 190 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 NLRC3Q7RTR2 1065 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 MYPOPQ86VE0 399 aaPredicted RBP9.19□□□□□ -0.94
CLCN6-208ENST00000494028 ZADH2Q8N4Q0 377 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 ZDHHC22Q8N966 263 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 PXT1Q8NFP0 134 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 EMG1Q92979 244 aaKnown RBP9.19□□□□□ -0.94
CLCN6-208ENST00000494028 SARAFQ96BY9 339 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 S100A13Q99584 98 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 PRRT1Q99946 306 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 REPIN1Q9BWE0 567 aaKnown RBP9.19□□□□□ -0.94
CLCN6-208ENST00000494028 PAPOLGQ9BWT3 736 aaKnown RBP9.19□□□□□ -0.94
CLCN6-208ENST00000494028 ELL3Q9HB65 397 aaPredicted RBP9.19□□□□□ -0.94
CLCN6-208ENST00000494028 ZNF581Q9P0T4 197 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 PIPOXQ9P0Z9 390 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 SCP2D1Q9UJQ7 156 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 PLEKHA6Q9Y2H5 1048 aa9.19□□□□□ -0.94
CLCN6-208ENST00000494028 UBE2QL1A1L167 161 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 OR2AT4A6NND4 320 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 ZNF850A8MQ14 1090 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 SERPINE3A8MV23 424 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 H3BUI4 141 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 KLK10O43240 276 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 HTR3BO95264 441 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 CST4P01036 141 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 NGFP01138 241 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 ZNF14P17017 642 aaPredicted RBP9.18□□□□□ -0.94
CLCN6-208ENST00000494028 CCNOP22674 350 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 CHATP28329 748 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 BLVRBP30043 206 aaPredicted RBP9.18□□□□□ -0.94
CLCN6-208ENST00000494028 APLNRP35414 380 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 FUT6P51993 359 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 ATP1B3P54709 279 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 UBE2MP61081 183 aaKnown RBP9.18□□□□□ -0.94
CLCN6-208ENST00000494028 AKAP13Q12802 2813 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 MALLQ13021 153 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 ARFRP1Q13795 201 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 DAZAP2Q15038 168 aaPredicted RBP9.18□□□□□ -0.94
CLCN6-208ENST00000494028 ARL6IP1Q15041 203 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 RSU1Q15404 277 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 SCGB2B2Q4G0G5 96 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 FREM2Q5SZK8 3169 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 SIGIRRQ6IA17 410 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 VWA1Q6PCB0 445 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 Q6ZS92 163 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 FAM214BQ7L5A3 538 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 HOGA1Q86XE5 327 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 ZDHHC23Q8IYP9 409 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 ASCC1Q8N9N2 400 aaKnown RBP9.18□□□□□ -0.94
CLCN6-208ENST00000494028 OR11H4Q8NGC9 324 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 OR5M9Q8NGP3 310 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 OR6K3Q8NGY3 331 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 GRPEL2Q8TAA5 225 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 ZNF431Q8TF32 576 aaPredicted RBP9.18□□□□□ -0.94
CLCN6-208ENST00000494028 CCDC107Q8WV48 283 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 PIGCQ92535 297 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 WNT2BQ93097 391 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 FBXW5Q969U6 566 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 HYLS1Q96M11 299 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 OCSTAMPQ9BR26 566 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 TMEM246Q9BRR3 403 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 CHST6Q9GZX3 395 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 ALX4Q9H161 411 aaPredicted RBP9.18□□□□□ -0.94
CLCN6-208ENST00000494028 SLA2Q9H6Q3 261 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 FN3KRPQ9HA64 309 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 LHX6Q9UPM6 363 aa9.18□□□□□ -0.94
CLCN6-208ENST00000494028 SLC7A11Q9UPY5 501 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms