RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 DUX4L3P0CJ86 424 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 DUX4L4P0CJ87 422 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 DUX4L5P0CJ88 424 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 DUX4L6P0CJ89 424 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 DUX4L7P0CJ90 424 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 NPY4RP50391 375 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 KLHL22Q53GT1 634 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 HAGHLQ6PII5 290 aaPredicted RBP13.43□□□□□ -0.26
SATB1-217ENST00000493952 DUX4L9Q6RFH8 374 aaPredicted RBP13.43□□□□□ -0.26
SATB1-217ENST00000493952 SYS1Q8N2H4 156 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 TEX29Q8N6K0 151 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 SETD9Q8NE22 299 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 RAB40AQ8WXH6 277 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 AQP3Q92482 292 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 C12orf43Q96C57 262 aaKnown RBP13.43□□□□□ -0.26
SATB1-217ENST00000493952 TECTBQ96PL2 329 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 RASSF4Q9H2L5 321 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 FGF20Q9NP95 211 aaPredicted RBP13.43□□□□□ -0.26
SATB1-217ENST00000493952 INPP5EQ9NRR6 644 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 SNTG1Q9NSN8 517 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 ERVK-18Q9QC07 812 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 KAAG1Q9UBP8 84 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 DUX4Q9UBX2 424 aa13.43□□□□□ -0.26
SATB1-217ENST00000493952 PQLC2LA1A4F0 135 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 C22orf46C9J442 243 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 GNAO1P09471 354 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 LIMS3P0CW19 117 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 LIMS4P0CW20 117 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 AMY2BP19961 511 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 SRSF2Q01130 221 aaKnown RBP13.42□□□□□ -0.26
SATB1-217ENST00000493952 PAX8Q06710 450 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 IL18R1Q13478 541 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 TMEM244Q5VVB8 128 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 STUMQ69YW2 141 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 BTNL3Q6UXE8 466 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 CCDC54Q8NEL0 328 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 OR5T2Q8NGG2 359 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 NANPQ8TBE9 248 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 TRMT10AQ8TBZ6 339 aaKnown RBP13.42□□□□□ -0.26
SATB1-217ENST00000493952 MRPL48Q96GC5 212 aaKnown RBP13.42□□□□□ -0.26
SATB1-217ENST00000493952 CCL13Q99616 98 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 NUDT16L1Q9BRJ7 211 aaKnown RBP13.42□□□□□ -0.26
SATB1-217ENST00000493952 MRI1Q9BV20 369 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 DNAJB11Q9UBS4 358 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 AUP1Q9Y679 476 aa13.42□□□□□ -0.26
SATB1-217ENST00000493952 OR4C45A6NMZ5 311 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 DVL1O14640 695 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 TFF1P04155 84 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 ISG15P05161 165 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 EPHA1P21709 976 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 GLRA1P23415 457 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 CAPGP40121 348 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 HAAOP46952 286 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 CCR9P51686 369 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 SLC34A1Q06495 639 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 ALKBH1Q13686 389 aaKnown RBP13.41□□□□□ -0.26
SATB1-217ENST00000493952 UBE2V2Q15819 145 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 FGFRL1Q8N441 504 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 FAM216BQ8N7L0 139 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 OR10AC1Q8NH08 325 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 NPRL2Q8WTW4 380 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 MYCBPQ99417 103 aaPredicted RBP13.41□□□□□ -0.26
SATB1-217ENST00000493952 JAM3Q9BX67 310 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 CHST5Q9GZS9 411 aa13.41□□□□□ -0.26
SATB1-217ENST00000493952 KIR2DS1A0A191URI9 304 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 E9PI62 339 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 H0YAE9 185 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 J3QT63 122 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 SYNGR1O43759 233 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 ARMCX4Q5H9R4 360 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 KLF17Q5JT82 389 aaPredicted RBP13.4□□□□□ -0.26
SATB1-217ENST00000493952 SLC36A1Q7Z2H8 476 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 ZNF573Q86YE8 665 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 CALHM1Q8IU99 346 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 EGFL6Q8IUX8 553 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 ANGPTL6Q8NI99 470 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 ZNF671Q8TAW3 534 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 NRG4Q8WWG1 115 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 TMIGD2Q96BF3 282 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 ADAT3Q96EY9 351 aaPredicted RBP13.4□□□□□ -0.26
SATB1-217ENST00000493952 ZNF488Q96MN9 340 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 VCXQ9H320 206 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 NLKQ9UBE8 527 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
SATB1-217ENST00000493952 IGKV1-27A0A075B6S5 117 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 FAM230AA0A1W2PPH8 454 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 TCF21O43680 179 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 ENSAO43768 121 aaKnown RBP13.39□□□□□ -0.27
SATB1-217ENST00000493952 GATBO75879 557 aaKnown RBP13.39□□□□□ -0.27
SATB1-217ENST00000493952 PGA5P0DJD9 388 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 SELLP14151 372 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 DCKP27707 260 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 ETV1P50549 477 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 SCGB2A2Q13296 93 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 ATPAF1Q5TC12 328 aaPredicted RBP13.39□□□□□ -0.27
SATB1-217ENST00000493952 CD276Q5ZPR3 534 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 LAIR2Q6ISS4 152 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 ZNF788Q6ZQV5 615 aa13.39□□□□□ -0.27
SATB1-217ENST00000493952 C8orf59Q8N0T1 100 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms