RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 FAM215AQ9Y5M1 114 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.3□□□□□ -0.927e-6■□□□□ 9.3
PDLIM1-205ENST00000493949 TRAV36DV7A0A075B6V5 113 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 A6NIZ1 184 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 PRR32B1ATL7 298 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 F5H0A9 414 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 F8W036 122 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 SCDO00767 359 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF264O43296 627 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 RPP14O95059 124 aaKnown RBP9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 SIX6O95475 246 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 IL33O95760 270 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 PLGP00747 810 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 PLATP00750 562 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 IFNA2P01563 188 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 IGKV1D-16P01601 117 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 CRHP06850 196 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 TMIGD3P0DMS9 266 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 PTNP21246 168 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 MAOAP21397 527 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 PSMB6P28072 239 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 HSD11B1P28845 292 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 PMELP40967 661 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 AQP2P41181 271 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 GPR85P60893 370 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 RAP1BP61224 184 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 RAP1AP62834 184 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 FAM53BQ14153 422 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 ARL6IP1Q15041 203 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 SGCBQ16585 318 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 FBXL19-AS1Q494R0 122 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 RNF212Q495C1 297 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 MESTQ5EB52 335 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 AVPI1Q5T686 147 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 RTL6Q6ICC9 239 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 ZAR1Q86SH2 424 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 PRSS35Q8N3Z0 413 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF511Q8NB15 262 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 OR1J2Q8NGS2 313 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 PPP1R1CQ8WVI7 109 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNRF4Q8WWF5 429 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 METTL21AQ8WXB1 218 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 FAM46BQ96A09 425 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 LPAR4Q99677 370 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 VN1R1Q9GZP7 353 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 MS4A7Q9GZW8 240 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 LAT2Q9GZY6 243 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 ADAM19Q9H013 955 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 MOB1AQ9H8S9 216 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 C19orf25Q9UFG5 118 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 KLHDC2Q9Y2U9 406 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 KLF13Q9Y2Y9 288 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 OR10H1Q9Y4A9 318 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 R4GMQ9 66 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 HEATR5AQ86XA9 2040 aa9.29□□□□□ -0.92
PDLIM1-205ENST00000493949 C9orf170A2RU37 121 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 FAM74A7A6NL05 159 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 FIGNL2A6NMB9 653 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 KLRC4-KLRK1H3BQV0 150 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 CHRM2P08172 466 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 GSTP1P09211 210 aaKnown RBP9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 CT45A8P0DMV1 189 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 CT45A9P0DMV2 189 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 HPGDP15428 266 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 BDKRB2P30411 391 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 RAB5BP61020 215 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 BLOC1S1P78537 153 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 RPL18Q07020 188 aaKnown RBP9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 KRTAP1-1Q07627 177 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 PJVKQ0ZLH3 352 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 SURF2Q15527 256 aaPredicted RBP9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 FAM74A3Q4VXF1 159 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 CT45A2Q5DJT8 189 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 VAX1Q5SQQ9 334 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 ATRAIDQ6UW56 229 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 NPSR1Q6W5P4 371 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 KDM8Q8N371 416 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 OR5AP2Q8NGF4 316 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 OR13C8Q8NGS7 320 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 OR52N5Q8NH56 324 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF519Q8TB69 540 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 ZPLD1Q8TCW7 415 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 AQP10Q96PS8 301 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 TSPAN32Q96QS1 320 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 ELOVL3Q9HB03 270 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 CHMP1AQ9HD42 196 aaPredicted RBP9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 PPP4R1LQ9P1A2 415 aa9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 ZMAT5Q9UDW3 170 aaKnown RBP9.28□□□□□ -0.92
PDLIM1-205ENST00000493949 A0A1W2PPR1 153 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 PRSS37A4D1T9 235 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF208O43345 1280 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 AKR7A3O95154 331 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 NSA2O95478 260 aaKnown RBP9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 BGLAPP02818 100 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 FCER2P06734 321 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 DNASE1L1P49184 302 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 CYB561P49447 251 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 MEOX2P50222 304 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 RPL27P61353 136 aaKnown RBP9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 IL13RA1P78552 427 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms