RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 RAC3P60763 192 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 BSPH1Q075Z2 132 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 SRSF4Q08170 494 aaKnown RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 SPOCK1Q08629 439 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 RASGEF1BQ0VAM2 473 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 PJVKQ0ZLH3 352 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 ALKBH1Q13686 389 aaKnown RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 SAPCD1Q5SSQ6 148 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 NCMAPQ5T1S8 102 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 HIST2H3PS2Q5TEC6 136 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 ABLIM2Q6H8Q1 611 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 DRAM2Q6UX65 266 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 Q6ZTK2 550 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 BHLHA15Q7RTS1 189 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 TSEN54Q7Z6J9 526 aaKnown RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 C10orf111Q8N326 155 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF611Q8N823 705 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF485Q8NCK3 441 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 OR2AK2Q8NG84 335 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 OR4F15Q8NGB8 312 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 OR52J3Q8NH60 311 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 FCAMRQ8WWV6 532 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 GATAD2BQ8WXI9 593 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 SLAMF9Q96A28 289 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 MOAP1Q96BY2 351 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 NEURL3Q96EH8 262 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 SAT2Q96F10 170 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 ABHD1Q96SE0 405 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 TMED9Q9BVK6 235 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 SEC61A2Q9H9S3 476 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 BCO1Q9HAY6 547 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 TREM1Q9NP99 234 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 TRIM36Q9NQ86 728 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 GLRX2Q9NS18 164 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 MAN2C1Q9NTJ4 1040 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 UQCC1Q9NVA1 299 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 GAR1Q9NY12 217 aaKnown RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 VSX1Q9NZR4 365 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 LAMP3Q9UQV4 416 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 RASD1Q9Y272 281 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 EXOGQ9Y2C4 368 aaKnown RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 RNF222A6NCQ9 220 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ACOD1A6NK06 481 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 MARCH11A6NNE9 402 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF716A6NP11 495 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 SHISA9B4DS77 424 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 INAFM1C9JVW0 142 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 M0R129 80 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 OVOL3O00110 214 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 TGOLN2O43493 480 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 TLX2O43763 284 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-234ENST00000493923 OR10H3O60404 316 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ARL6IP5O75915 188 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 AK1P00568 194 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 IGHA1P01876 353 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 THBS1P07996 1170 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 HOXB5P09067 269 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 CD3GP09693 182 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 OR8U8P0C7N1 319 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 LIMS3P0CW19 117 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 LIMS4P0CW20 117 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 TFPIP10646 304 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF35P13682 527 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF44P15621 663 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 PAX1P15863 534 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 HOXA5P20719 270 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 BDKRB2P30411 391 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 MAGEB1P43366 347 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 SRP9P49458 86 aaKnown RBP7.11□□□□□ -1.27
HDAC6-234ENST00000493923 MVDP53602 400 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 NUTF2P61970 127 aaKnown RBP7.11□□□□□ -1.27
HDAC6-234ENST00000493923 DGCR2P98153 550 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 SSBP1Q04837 148 aaKnown RBP7.11□□□□□ -1.27
HDAC6-234ENST00000493923 GAGE1Q13065 139 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 CBFBQ13951 182 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 DOC2BQ14184 412 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 RNPS1Q15287 305 aaKnown RBP7.11□□□□□ -1.27
HDAC6-234ENST00000493923 RBMS2Q15434 407 aaKnown RBP7.11□□□□□ -1.27
HDAC6-234ENST00000493923 PGGHGQ32M88 737 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 GLT8D1Q68CQ7 371 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ADAM5Q6NVV9 412 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 C11orf88Q6PI97 169 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 SMARCD3Q6STE5 483 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 PRSS57Q6UWY2 283 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 TMPPEQ6ZT21 453 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ACOT7LQ6ZUV0 252 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 DCXRQ7Z4W1 244 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 PEG10Q86TG7 708 aaKnown RBP7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF546Q86UE3 836 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 GID4Q8IVV7 300 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ARRDC1Q8N5I2 433 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF433Q8N7K0 673 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-234ENST00000493923 SDR9C7Q8NEX9 313 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 STEAP2Q8NFT2 490 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 OR5R1Q8NH85 324 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 ST8SIA1Q92185 356 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 HIST1H2BAQ96A08 127 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 MDFIQ99750 246 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 SLC35A5Q9BS91 424 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 MRPL37Q9BZE1 423 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms