RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 BAALCQ8WXS3 180 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 PDCD1LG2Q9BQ51 273 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 MS4A8Q9BY19 250 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 RGCCQ9H4X1 137 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 ZNF229Q9UJW7 825 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 NDRG2Q9UN36 371 aaKnown RBP1.7□□□□□ -2.14
SMC4-223ENST00000493695 SHROOM3Q8TF72 1996 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 ZSWIM8A7E2V4 1837 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 ISPDA4D126 451 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 GOLGA6L4A6NEF3 574 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 GOLGA8JA6NMD2 632 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 MYL12BO14950 172 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 IGLV7-43P04211 117 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 SLC35G6P0C7Q6 338 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 P0C880 135 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 GOLGA8HP0CJ92 632 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 PRKACAP17612 351 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 MPIP34949 423 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 ARL2P36404 184 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 GALR1P47211 349 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 TGM4P49221 684 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 SLC35A1P78382 337 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 MEF2CQ06413 473 aaPredicted RBP1.69□□□□□ -2.14
SMC4-223ENST00000493695 DOC2AQ14183 400 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 LINC00523Q86TU6 105 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 SLC7A5P1Q8MH63 180 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 ZNF680Q8NEM1 530 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 GABRG3Q99928 467 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 STMN4Q9H169 189 aaPredicted RBP1.69□□□□□ -2.14
SMC4-223ENST00000493695 CYP3A43Q9HB55 503 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 SND1-IT1Q9HBX3 110 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 ZMAT5Q9UDW3 170 aaKnown RBP1.69□□□□□ -2.14
SMC4-223ENST00000493695 HMGXB4Q9UGU5 601 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 TFR2Q9UP52 801 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 PPIL1Q9Y3C6 166 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 SEC16AO15027 2179 aa1.69□□□□□ -2.14
SMC4-223ENST00000493695 A0A1W2PRF3 423 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 A0A1W2PRM7 423 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 CLDN34H7C241 214 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 SMC2O95347 1197 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 IGHV1-46P01743 117 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 PFN1P07737 140 aaKnown RBP1.68□□□□□ -2.14
SMC4-223ENST00000493695 IVDP26440 423 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 GNRHRP30968 328 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 CCT6AP40227 531 aaKnown RBP1.68□□□□□ -2.14
SMC4-223ENST00000493695 HCCSP53701 268 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 PAFAH1B2P68402 229 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 C2orf54Q08AI8 447 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 ZNF664Q8N3J9 261 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 TMEM104Q8NE00 496 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 ZFAND1Q8TCF1 268 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 TVP23CQ96ET8 276 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 ARMC7Q9H6L4 198 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 KIR3DX1Q9H7L2 352 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 RWDD2AQ9UIY3 292 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 CARHSP1Q9Y2V2 147 aaKnown RBP1.68□□□□□ -2.14
SMC4-223ENST00000493695 SVILO95425 2214 aa1.68□□□□□ -2.14
SMC4-223ENST00000493695 NPHP4O75161 1426 aaPredicted RBP1.67□□□□□ -2.14
SMC4-223ENST00000493695 MYO16Q9Y6X6 1858 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 C2orf16Q68DN1 1984 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 LOC102724200A0A096LPH7 203 aaPredicted RBP1.67□□□□□ -2.14
SMC4-223ENST00000493695 TRAV8-6A0A0B4J262 113 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 DFFAO00273 331 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 UPK1AO00322 258 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 CNMDO75829 334 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 TRAPPC6AO75865 159 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 GCGP01275 180 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 CRYGCP07315 174 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 PAX6P26367 422 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 MLF1P58340 268 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 MTPNP58546 118 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 TRDNQ13061 729 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 KRTAP6-3Q3LI67 103 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 NKAIN1Q4KMZ8 207 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 CPTPQ5TA50 214 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 HHATQ5VTY9 493 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 TTC19Q6DKK2 380 aaPredicted RBP1.67□□□□□ -2.14
SMC4-223ENST00000493695 C16orf87Q6PH81 154 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 EPGNQ6UW88 154 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 BBS7Q8IWZ6 715 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 OR6K6Q8NGW6 343 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 TFGQ92734 400 aaPredicted RBP1.67□□□□□ -2.14
SMC4-223ENST00000493695 HGDQ93099 445 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 SEC22CQ9BRL7 303 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 CHRNA10Q9GZZ6 450 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 TMEM100Q9NV29 134 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 ADA2Q9NZK5 511 aa1.67□□□□□ -2.14
SMC4-223ENST00000493695 BAZ2AQ9UIF9 1905 aaKnown RBP1.67□□□□□ -2.14
SMC4-223ENST00000493695 KIF27Q86VH2 1401 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 LOXHD1Q8IVV2 1947 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 TRAV8-4A0A0B4J246 113 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 OR6C70A6NIJ9 312 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 CENPXA8MT69 81 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 C4orf51C9J302 202 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 J3QT63 122 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 GMDSO60547 372 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 P01737 135 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 LGALS3P17931 250 aaKnown RBP1.66□□□□□ -2.14
SMC4-223ENST00000493695 TGFBR1P36897 503 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 PSMD4P55036 377 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms