RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 EDF1O60869 148 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 NPIPB7O75200 414 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 MRPL33O75394 65 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 KRT34O76011 436 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 MFN2O95140 757 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 MPZL1O95297 269 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 AHSA1O95433 338 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 CRHP06850 196 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 DBIP07108 87 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 OR4A8P0C604 315 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 THRBP10828 461 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 CD79AP11912 226 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 IDO1P14902 403 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 NQO1P15559 274 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 CXCR1P25024 350 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 COL8A2P25067 703 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 MPV17P39210 176 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 AQP2P41181 271 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 FABP6P51161 128 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ERVK-25P63136 954 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 H3F3AP84243 136 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 NAAAQ02083 359 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ILF2Q12905 390 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 TMEM249Q2WGJ8 235 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 LIN52Q52LA3 116 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 DMRTC1Q5HYR2 192 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 FAM201AQ5SY85 155 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 C6orf52Q5T4I8 152 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ANXA8L1Q5VT79 327 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 RSBN1Q5VWQ0 802 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 RAB12Q6IQ22 244 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ZCCHC12Q6PEW1 402 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 TBPL2Q6SJ96 375 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 NHLRC1Q6VVB1 395 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 SPATA21Q7Z572 469 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 MTERF4Q7Z6M4 381 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 SKA3Q8IX90 412 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 MMD2Q8IY49 270 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 PEX5LQ8IYB4 626 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 MUC15Q8N387 334 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 FAM89BQ8N5H3 189 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 EIF1ADQ8N9N8 165 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 OR10G7Q8NGN6 311 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 OR10A6Q8NH74 314 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 AKR7LQ8NHP1 331 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ADAMTS16Q8TE57 1224 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 C10orf82Q8WW14 230 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 CKAP2Q8WWK9 683 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 GEMIN6Q8WXD5 167 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 TMEM234Q8WY98 164 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 NSMAFQ92636 917 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 BCL2L2Q92843 193 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 SLAMF9Q96A28 289 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 RASD2Q96D21 266 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ITCHQ96J02 903 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 TPD52L3Q96J77 140 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF75AQ96N20 296 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ZFP3Q96NJ6 502 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 TSSK2Q96PF2 358 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 TRNT1Q96Q11 434 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ZBTB18Q99592 522 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ARHGDIGQ99819 225 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 TTTY10Q9BZA0 68 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 BPESC1Q9GZL8 116 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 RERGLQ9H628 205 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 JPT2Q9H910 190 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 WDR76Q9H967 626 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 CRLF2Q9HC73 371 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 CHCHD3Q9NX63 227 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 CMTM6Q9NX76 183 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 VNN3Q9NY84 501 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 ANAPC11Q9NYG5 84 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 TMCC3Q9ULS5 477 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 SLC35A3Q9Y2D2 325 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 UGT2A1Q9Y4X1 527 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 DNHD1Q96M86 4753 aa2.34□□□□□ -2.04
PTCD3-218ENST00000493430 TRBV4-1A0A0J9YWV2 114 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 A0A1B0GW55 424 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 OOEPA6NGQ2 149 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ZSCAN5BA6NJL1 495 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 TRPC5OSA6NMA1 111 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 RNF212BA8MTL3 300 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF724A8MTY0 619 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 M0R129 80 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 DCTN6O00399 190 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CDC42EP2O14613 210 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 FFAR1O14842 300 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 AIM2O14862 343 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ANGPT2O15123 496 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 MGRN1O60291 552 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 PDE5AO76074 875 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 KRT75O95678 551 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF682O95780 498 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 BCL10O95999 233 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 IGHV2-70P01814 119 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 IL6P05231 212 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 KRT16P08779 473 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ADRA2AP08913 450 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 IFI6P09912 130 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 DUX4L2P0CJ85 424 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms