RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 KIF20BQ96Q89 1820 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TRAV39A0A0B4J263 110 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 DAPL1A0PJW8 107 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM189A5PLL7 270 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 USP27XA6NNY8 438 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 FAM166BA8MTA8 275 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 A8MVM7 634 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 A8MXK9 166 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 B5MCH6 92 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 RBFOX2O43251 390 aaKnown RBP eCLIP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF207O43670 478 aaKnown RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 PSPNO60542 156 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TOXO94900 526 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 GCGP01275 180 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 ELANEP08246 267 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 ZSCAN5DPP0CG00 497 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 PSG1P11464 419 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 CERS1P27544 350 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 BRS3P32247 399 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 RPL3P39023 403 aaKnown RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 CYP2J2P51589 502 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TAS2R30P59541 319 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 SELENOWP63302 87 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 HIST1H3AP68431 136 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 H3F3AP84243 136 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 PLP2Q04941 152 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF844Q08AG5 666 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF763Q0D2J5 394 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 FABP9Q0Z7S8 132 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 UNC119Q13432 240 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF846Q147U1 533 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 MEF2DQ14814 521 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 KIR3DS1Q14943 382 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 EBPQ15125 230 aaKnown RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM69Q5SWH9 247 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 SFRP4Q6FHJ7 346 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 ZFAND6Q6FIF0 208 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 FAAP20Q6NZ36 180 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TRIM40Q6P9F5 258 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TBPL2Q6SJ96 375 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 EPGNQ6UW88 154 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 NAPRTQ6XQN6 538 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 C22orf34Q6ZV56 151 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 HIST2H3AQ71DI3 136 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 NAA40Q86UY6 237 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 PIGZQ86VD9 579 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 GLCCI1Q86VQ1 547 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 BEST3Q8N1M1 668 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 MFSD4AQ8N468 514 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 PRELID2Q8N945 189 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 C11orf45Q8TAV5 145 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 ASB13Q8WXK3 278 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 RASL10AQ92737 203 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 RDH5Q92781 318 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TSACCQ96A04 125 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 WBP1Q96G27 269 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 SCMH1Q96GD3 660 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TP53RKQ96S44 253 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 CSF3RQ99062 836 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 FOXC2Q99958 501 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 HSPB9Q9BQS6 159 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 NDFIP1Q9BT67 221 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 DOHHQ9BU89 302 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 PITPNM3Q9BZ71 974 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 NKX6-2Q9C056 277 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 PRO1933Q9H354 126 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 SRMSQ9H3Y6 488 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 GLIPR2Q9H4G4 154 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 C7orf69Q9H7B7 122 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 RBFOX1Q9NWB1 397 aaKnown RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 AURKAIP1Q9NWT8 199 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 MRPL16Q9NX20 251 aaKnown RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 FBXL2Q9UKC9 423 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 SCML2Q9UQR0 700 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 LSM5Q9Y4Y9 91 aaKnown RBP3.6□□□□□ -1.83
BRCA1-220ENST00000492859 RAI2Q9Y5P3 530 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 V9GYS6 101 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TTC3P53804 2025 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 MYH4Q9Y623 1939 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 LRRIQ1Q96JM4 1722 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 TONSLQ96HA7 1378 aa3.6□□□□□ -1.83
BRCA1-220ENST00000492859 A0A087WUU8 490 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM72A0PK05 275 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 OR2M5A3KFT3 312 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 LRIT2A6NDA9 550 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF587BE7ETH6 402 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 G3V2L1 256 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 HSD17B6O14756 317 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 LSM8O95777 96 aaKnown RBP3.59□□□□□ -1.83
BRCA1-220ENST00000492859 GLUD1P00367 558 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 IFNA7P01567 189 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 PFN1P07737 140 aaKnown RBP3.59□□□□□ -1.83
BRCA1-220ENST00000492859 VSIG10L2P0DP72 767 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 S100A2P29034 98 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 MNDAP41218 407 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 GABRA2P47869 451 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 OR1D4P47884 311 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 OR1E2P47887 323 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 AMTP48728 403 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 ST3GAL4Q11206 333 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms