RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SETD3Q86TU7 594 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZCCHC24Q8N2G6 241 aaKnown RBP1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 SYS1Q8N2H4 156 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 SLC35G3Q8N808 338 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 SLC25A29Q8N8R3 303 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 TMEM105Q8N8V8 129 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 OR2Z1Q8NG97 314 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 OR4M2Q8NGB6 313 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 NDNFQ8TB73 568 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZFAND1Q8TCF1 268 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 SFXN5Q8TD22 340 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 RTN4IP1Q8WWV3 396 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 SNF8Q96H20 258 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ALS2CR12Q96Q35 445 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 NAPGQ99747 312 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZNF649Q9BS31 505 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ULBP2Q9BZM5 246 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 XKR8Q9H6D3 395 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 HAUS4Q9H6D7 363 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ANKHQ9HCJ1 492 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 CFL2Q9Y281 166 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZNF608Q9ULD9 1512 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 SCN4AP35499 1836 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 FAM240AA0A1B0GVK7 77 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 TVP23AA6NH52 213 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 BTNL10A8MVZ5 291 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 CENPBD1B2RD01 187 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 E7EWF7 191 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 K7EN84 100 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 M0R1B8 84 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 POLR1CO15160 346 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 CDRT1O95170 752 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 RPN2P04844 631 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 MMP7P09237 267 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 BGNP21810 368 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 CD9P21926 228 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 IL3RAP26951 378 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 PSMB5P28074 263 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 P2RY2P41231 377 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 MTPNP58546 118 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 IFFO1Q0D2I5 559 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 SHHQ15465 462 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 CDNFQ49AH0 187 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 LUZP6Q538Z0 58 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 DNLZQ5SXM8 178 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 APOBEC3HQ6NTF7 200 aaKnown RBP1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 DEGS2Q6QHC5 323 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 CA13Q8N1Q1 262 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 LRRC52Q8N7C0 313 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 ST20-AS1Q8NBB2 130 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 OR6N2Q8NGY6 317 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 LRRC39Q96DD0 335 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 RMI2Q96E14 147 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 GLT1D1Q96MS3 346 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 Q96MT0 163 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZFP3Q96NJ6 502 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 IP6K3Q96PC2 410 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 UTP23Q9BRU9 249 aaKnown RBP1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 SIKE1Q9BRV8 207 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZNF717Q9BY31 904 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 COA1Q9GZY4 146 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 C6orf50Q9HD87 102 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 DDIT4Q9NX09 232 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 TAS2R5Q9NYW4 299 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 TFR2Q9UP52 801 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 SVILO95425 2214 aa1.5□□□□□ -2.17
HMGB1P30-201ENST00000492455 TMEM72A0PK05 275 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 FAM25EA8MYX2 175 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 LGALS9O00182 355 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 PSMD11O00231 422 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZNF593O00488 134 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 LHBP01229 141 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 TPM1P09493 284 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 CCDC172P0C7W6 258 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 LIPCP11150 499 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 NELFEP18615 380 aaKnown RBP1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 NTF3P20783 257 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 ARR3P36575 388 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 TAS2R43P59537 309 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 PPP1CAP62136 330 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 GRB2P62993 217 aaKnown RBP1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 ADIGQ0VDE8 80 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 LAMTOR4Q0VGL1 99 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 MAD2L1BPQ15013 274 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 TOMM34Q15785 309 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 TTC32Q5I0X7 151 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 HHATQ5VTY9 493 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 THOC7Q6I9Y2 204 aaKnown RBP1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 SLC25A34Q6PIV7 304 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 OR2M7Q8NG81 312 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 OR5M1Q8NGP8 315 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 OR52N1Q8NH53 320 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 NT5CQ8TCD5 201 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 LGALS14Q8TCE9 139 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 MRPL48Q96GC5 212 aaKnown RBP1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 MSANTD3Q96H12 275 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 PDCD1LG2Q9BQ51 273 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 MARVELD1Q9BSK0 173 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 HINT2Q9BX68 163 aa1.49□□□□□ -2.17
HMGB1P30-201ENST00000492455 RAB1BQ9H0U4 201 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms