RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 BOLLQ8N9W6 283 aaKnown RBP12.66□□□□□ -0.38
SS18L1-204ENST00000491916 OR10Z1Q8NGY1 313 aa12.66□□□□□ -0.38
SS18L1-204ENST00000491916 AQP3Q92482 292 aa12.66□□□□□ -0.38
SS18L1-204ENST00000491916 C10orf35Q96D05 121 aa12.66□□□□□ -0.38
SS18L1-204ENST00000491916 MRPL48Q96GC5 212 aaKnown RBP12.66□□□□□ -0.38
SS18L1-204ENST00000491916 PDCD1LG2Q9BQ51 273 aa12.66□□□□□ -0.38
SS18L1-204ENST00000491916 CHST5Q9GZS9 411 aa12.66□□□□□ -0.38
SS18L1-204ENST00000491916 MMP26Q9NRE1 261 aa12.66□□□□□ -0.38
SS18L1-204ENST00000491916 MIOXQ9UGB7 285 aa12.66□□□□□ -0.38
SS18L1-204ENST00000491916 IGHV3OR15-7A0A075B7D8 119 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 TRAV20A0A0B4J274 112 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 A0A1B0GW55 424 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 hCG_1807616A0A1W2PRN6 198 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 ANKRD61A6NGH8 418 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 OGG1O15527 345 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 PHF1O43189 567 aaPredicted RBP12.65□□□□□ -0.38
SS18L1-204ENST00000491916 AKR7A2O43488 359 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 GYPAP02724 150 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 DUX4L2P0CJ85 424 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 DUX4L3P0CJ86 424 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 DUX4L4P0CJ87 422 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 DUX4L5P0CJ88 424 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 DUX4L6P0CJ89 424 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 DUX4L7P0CJ90 424 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 CPT2P23786 658 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 GBX2P52951 348 aaPredicted RBP12.65□□□□□ -0.38
SS18L1-204ENST00000491916 MRPL28Q13084 256 aaKnown RBP12.65□□□□□ -0.38
SS18L1-204ENST00000491916 DUX4L9Q6RFH8 374 aaPredicted RBP12.65□□□□□ -0.38
SS18L1-204ENST00000491916 IL17RELQ6ZVW7 336 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 KCTD8Q6ZWB6 473 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 GLCCI1Q86VQ1 547 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 PRIMA1Q86XR5 153 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 CALHM1Q8IU99 346 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 OR52N1Q8NH53 320 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 FGGYQ96C11 551 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 HIST1H2AAQ96QV6 131 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 MYCBPQ99417 103 aaPredicted RBP12.65□□□□□ -0.38
SS18L1-204ENST00000491916 TMPRSS13Q9BYE2 586 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 BABAM2Q9NXR7 383 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 ERVK-18Q9QC07 812 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 DUX4Q9UBX2 424 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 HHLA2Q9UM44 414 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 PCDHB10Q9UN67 800 aa12.65□□□□□ -0.38
SS18L1-204ENST00000491916 FBN1P35555 2871 aaKnown RBP12.65□□□□□ -0.38
SS18L1-204ENST00000491916 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 PPIAL4CA0A0B4J2A2 164 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 TMEM212A6NML5 194 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 SLC1A7O00341 560 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 SYNGR1O43759 233 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 ZNF12P17014 697 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 MPZP25189 248 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 CDK5R1Q15078 307 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 CCDC58Q4VC31 144 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 ASPHD2Q6ICH7 369 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 RPL22L1Q6P5R6 122 aaKnown RBP12.64□□□□□ -0.39
SS18L1-204ENST00000491916 AHSA2Q719I0 299 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 UTS2BQ765I0 119 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 RNF144BQ7Z419 303 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 GATAD2BQ8WXI9 593 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 NEIL1Q96FI4 390 aaPredicted RBP12.64□□□□□ -0.39
SS18L1-204ENST00000491916 SMURF1Q9HCE7 757 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 KAAG1Q9UBP8 84 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 OPN4Q9UHM6 478 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 LRCH1Q9Y2L9 728 aa12.64□□□□□ -0.39
SS18L1-204ENST00000491916 RRP15Q9Y3B9 282 aaKnown RBP12.64□□□□□ -0.39
SS18L1-204ENST00000491916 TRBV2A0A0J9YWF9 115 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 NOS1APO75052 506 aaPredicted RBP12.63□□□□□ -0.39
SS18L1-204ENST00000491916 FOXH1O75593 365 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 TFF1P04155 84 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 CDK1P06493 297 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 RPS2P15880 293 aaKnown RBP12.63□□□□□ -0.39
SS18L1-204ENST00000491916 MUC1P15941 1255 aaPredicted RBP12.63□□□□□ -0.39
SS18L1-204ENST00000491916 HAAOP46952 286 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 SLC35A2P78381 396 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 ATPAF1Q5TC12 328 aaPredicted RBP12.63□□□□□ -0.39
SS18L1-204ENST00000491916 RNLSQ5VYX0 342 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 WDR25Q64LD2 544 aaPredicted RBP12.63□□□□□ -0.39
SS18L1-204ENST00000491916 STUMQ69YW2 141 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 DMKNQ6E0U4 476 aaPredicted RBP12.63□□□□□ -0.39
SS18L1-204ENST00000491916 HAGHLQ6PII5 290 aaPredicted RBP12.63□□□□□ -0.39
SS18L1-204ENST00000491916 TMPRSS11AQ6ZMR5 421 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 ANGPTL5Q86XS5 388 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 FGFRL1Q8N441 504 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 ZNF676Q8N7Q3 588 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 NANOGP1Q8N7R0 232 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 OR5AK2Q8NH90 309 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 HAVCR2Q8TDQ0 301 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 PP6455Q8WZ26 134 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 ZNF488Q96MN9 340 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 SSBP3Q9BWW4 388 aaPredicted RBP12.63□□□□□ -0.39
SS18L1-204ENST00000491916 VCX3BQ9H321 246 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 CDC42EP3Q9UKI2 254 aa12.63□□□□□ -0.39
SS18L1-204ENST00000491916 J3QT63 122 aa12.62□□□□□ -0.39
SS18L1-204ENST00000491916 NDUFA2O43678 99 aa12.62□□□□□ -0.39
SS18L1-204ENST00000491916 ACAA1P09110 424 aaPredicted RBP12.62□□□□□ -0.39
SS18L1-204ENST00000491916 CCDC159P0C7I6 412 aa12.62□□□□□ -0.39
SS18L1-204ENST00000491916 PGA5P0DJD9 388 aa12.62□□□□□ -0.39
SS18L1-204ENST00000491916 ATF1P18846 271 aa12.62□□□□□ -0.39
SS18L1-204ENST00000491916 MYL12AP19105 171 aa12.62□□□□□ -0.39
SS18L1-204ENST00000491916 VHLP40337 213 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms