RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-219ENST00000491747 RFPL4AA6NLU0 287 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 RFPL4AL1F8VTS6 287 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 BLOC1S5-TXNDC5H3BN57 136 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 APOC3P02656 99 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 CD14P08571 375 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 UBBP0CG47 229 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 UBCP0CG48 685 aaKnown RBP8.16□□□□□ -1.1
BRCA1-219ENST00000491747 MGMTP16455 207 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 CFPP27918 469 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 MPGP29372 298 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 PRSS3P35030 304 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 CDKN2AP42771 156 aaKnown RBP8.16□□□□□ -1.1
BRCA1-219ENST00000491747 ACTBP60709 375 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 RPS27AP62979 156 aaKnown RBP8.16□□□□□ -1.1
BRCA1-219ENST00000491747 UBA52P62987 128 aaKnown RBP8.16□□□□□ -1.1
BRCA1-219ENST00000491747 ACTG1P63261 375 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 FGL1Q08830 312 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 ZP4Q12836 540 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 C2orf68Q2NKX9 166 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 DCAF12L2Q5VW00 463 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 TMEM123Q8N131 208 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 STPG2Q8N412 459 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 WDR31Q8NA23 367 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 PXT1Q8NFP0 134 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 ALKBH3Q96Q83 286 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-219ENST00000491747 MNTQ99583 582 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 GPR160Q9UJ42 338 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 LAMP5Q9UJQ1 280 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 HIF3AQ9Y2N7 669 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 ALPK2Q86TB3 2170 aa8.16□□□□□ -1.1
BRCA1-219ENST00000491747 TRAV8-7A0A075B6U6 113 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 TRBV5-7A0A0A0MS05 114 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 ARPC4-TTLL3A0A0A6YYG9 625 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 A0A0D9SG52 128 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 OR5H1A6NKK0 313 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 ABHD16AO95870 558 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 RLN2P04090 185 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 SDHAP31040 664 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 UBE2MP61081 183 aaKnown RBP8.15□□□□□ -1.1
BRCA1-219ENST00000491747 EGR3Q06889 387 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 CLVS2Q5SYC1 327 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 CARD17Q5XLA6 110 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-219ENST00000491747 OR4D10Q8NGI6 311 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 OR2G2Q8NGZ5 317 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 OR52N5Q8NH56 324 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 LIPHQ8WWY8 451 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 PLPPR2Q96GM1 343 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF416Q9BWM5 594 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 LINC00470Q9BZP3 86 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 PCDHB16Q9NRJ7 776 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 TMEM14AQ9Y6G1 99 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 AKAP9Q99996 3911 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 ANKRD17O75179 2603 aaKnown RBP8.15□□□□□ -1.1
BRCA1-219ENST00000491747 ABCA4P78363 2273 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 TRAV18A0A075B6X5 111 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 DPRXA6NFQ7 191 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 OR4C45A6NMZ5 311 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 H3BUI4 141 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 NUPL2O15504 423 aaKnown RBP8.15□□□□□ -1.1
BRCA1-219ENST00000491747 KDM4BO94953 1096 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 GOSR1O95249 250 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 IGF2P01344 180 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 MELTFP08582 738 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 RAB3AP20336 220 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 AQP2P41181 271 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 RPL18Q07020 188 aaKnown RBP8.15□□□□□ -1.1
BRCA1-219ENST00000491747 MELKQ14680 651 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 PPA1Q15181 289 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 ALG10Q5BKT4 473 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 TIMM23BQ5SRD1 257 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 STEAP1BQ6NZ63 245 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 FAM122BQ7Z309 247 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF546Q86UE3 836 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 TMEM17Q86X19 198 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 OR51D1Q8NGF3 324 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 MRPS24Q96EL2 167 aaKnown RBP8.15□□□□□ -1.1
BRCA1-219ENST00000491747 SLC25A21Q9BQT8 299 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-219ENST00000491747 NELFAQ9H3P2 528 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 SLC17A5Q9NRA2 495 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 CYB5R1Q9UHQ9 305 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 KLHDC2Q9Y2U9 406 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 SLC25A15Q9Y619 301 aa8.15□□□□□ -1.1
BRCA1-219ENST00000491747 NOTCH2Q04721 2471 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 TMEM272A0A1B0GTI8 110 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 TEX46H3BTG2 121 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 PHYHO14832 338 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 OR6A2O95222 327 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 CD3DP04234 171 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 F13BP05160 661 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 POU3F4P49335 361 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 BIDP55957 195 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 TAS2R19P59542 299 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 CTXN1P60606 82 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 ETFDHQ16134 617 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 HIKESHIQ53FT3 197 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 BEX5Q5H9J7 111 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 NCMAPQ5T1S8 102 aa8.14□□□□□ -1.11
BRCA1-219ENST00000491747 LRFN4Q6PJG9 635 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms