RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 NMNAT3Q96T66 252 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 CGREF1Q99674 301 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 ROPN1BQ9BZX4 212 aaPredicted RBP10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 ROPN1Q9HAT0 212 aaPredicted RBP10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 RPRD1BQ9NQG5 326 aaKnown RBP10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 SIGLEC7Q9Y286 467 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 SNX13Q9Y5W8 968 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 IGHV2-26A0A0B4J1V2 119 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 SLC1A7O00341 560 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 FFAR1O14842 300 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 SLC25A17O43808 307 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 MTRF1O75570 445 aaKnown RBP10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 RPLP1P05386 114 aaKnown RBP10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 ZNF728P0DKX0 622 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 SNRPBP14678 240 aaKnown RBP10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 SPNP16150 400 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 BRS3P32247 399 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 PRDX4Q13162 271 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 IL18R1Q13478 541 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 KIR2DS1Q14954 304 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 GFOD2Q3B7J2 385 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 FAM27D1Q5T7N8 215 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 ZDHHC21Q8IVQ6 265 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 RNF113BQ8IZP6 322 aaKnown RBP10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 OFCC1Q8IZS5 231 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 ZNF561Q8N587 486 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 EIF1ADQ8N9N8 165 aaKnown RBP10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 HPSE2Q8WWQ2 592 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 FNDC11Q9BVV2 318 aa10.72□□□□□ -0.69
EXOSC3-207ENST00000490516 LY6G6CO95867 125 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 PRDX2P32119 198 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 IFNA8P32881 189 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 GPM6AP51674 278 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 RPS6KA3P51812 740 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 KRT72Q14CN4 511 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 TAF13Q15543 124 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 SNAPC1Q16533 368 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 DPY19L2P2Q6ZN68 376 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 DCXRQ7Z4W1 244 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 ZBTB46Q86UZ6 589 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 SATL1Q86VE3 508 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 MREGQ8N565 214 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 OR4P4Q8NGL7 312 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 TPD52L3Q96J77 140 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 ERMAPQ96PL5 475 aaPredicted RBP10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 KCNJ15Q99712 375 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 SSU72Q9NP77 194 aaKnown RBP10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 CENPMQ9NSP4 180 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 MPC1Q9Y5U8 109 aa10.71□□□□□ -0.69
EXOSC3-207ENST00000490516 TVP23AA6NH52 213 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 SERPINE3A8MV23 424 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 RENP00797 406 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 RBP4P02753 201 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 TK1P04183 234 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 ANXA2P07355 339 aaKnown RBP10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 GP9P14770 177 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 HTR1DP28221 377 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 INSL3P51460 131 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 SLC35B1P78383 322 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 SRSF7Q16629 238 aaKnown RBP eCLIP10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 EPGNQ6UW88 154 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 LYPD4Q6UWN0 246 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 ACP7Q6ZNF0 438 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 COMMD1Q8N668 190 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 CSNK2A3Q8NEV1 391 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 OR4C15Q8NGM1 316 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 OR4K13Q8NH42 304 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 PIGCQ92535 297 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNF488Q96MN9 340 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNF319Q9P2F9 582 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 HHLA2Q9UM44 414 aa10.7□□□□□ -0.7
EXOSC3-207ENST00000490516 OR6C68A6NDL8 312 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 M0QZK8 103 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 IGHV4-30-4P0DP06 118 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 HIST1H1CP16403 213 aaKnown RBP10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 ACKR3P25106 362 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 CX3CR1P49238 355 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 CYBRD1Q53TN4 286 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNF676Q8N7Q3 588 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 ANKRD42Q8N9B4 389 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 SLAMF6Q96DU3 332 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 RSRC1Q96IZ7 334 aaKnown RBP10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 SPATA25Q9BR10 227 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 CLEC7AQ9BXN2 247 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 OR51I2Q9H344 312 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 PAPOLBQ9NRJ5 636 aaKnown RBP10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 KCNG2Q9UJ96 466 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 MOB4Q9Y3A3 225 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 HSPE1-MOB4S4R3N1 261 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 KMT2AQ03164 3969 aa10.69□□□□□ -0.7
EXOSC3-207ENST00000490516 PYCR1P32322 319 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 FHL3Q13643 280 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 EIF2B1Q14232 305 aaKnown RBP10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 LRRC23Q53EV4 343 aaPredicted RBP10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 TEX38Q6PEX7 206 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 FAM57BQ71RH2 274 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 RRM2BQ7LG56 351 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 TCF23Q7RTU1 214 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 TIGD4Q8IY51 512 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 STPG2Q8N412 459 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms