RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CHIAQ9BZP6 476 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 MOB1AQ9H8S9 216 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 CLN6Q9NWW5 311 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 SLC25A10Q9UBX3 287 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-213ENST00000489045 ENOPH1Q9UHY7 261 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 ENPP5Q9UJA9 477 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 A0A0U1RQK1 487 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 OR5B21A6NL26 309 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 OR2AT4A6NND4 320 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 SIGLEC5O15389 551 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 MDKP21741 143 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-213ENST00000489045 BCL2L15Q5TBC7 163 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 FIP1L1Q6UN15 594 aaKnown RBP18.93■□□□□ 0.62
COL9A3-213ENST00000489045 CMTM4Q8IZR5 234 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 TMEM86BQ8N661 226 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 OR51G2Q8NGK0 314 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 C8orf46Q8TAG6 207 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 AQP3Q92482 292 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 DMRTB1Q96MA1 342 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 SEMA6AQ9H2E6 1030 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 SIRT7Q9NRC8 400 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 MRM2Q9UI43 246 aaKnown RBP18.93■□□□□ 0.62
COL9A3-213ENST00000489045 R4GMQ9 66 aa18.93■□□□□ 0.62
COL9A3-213ENST00000489045 MTRF1O75570 445 aaKnown RBP18.92■□□□□ 0.62
COL9A3-213ENST00000489045 ACAA1P09110 424 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-213ENST00000489045 ACTR3P61158 418 aa18.92■□□□□ 0.62
COL9A3-213ENST00000489045 PRB3Q04118 309 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-213ENST00000489045 ZNF684Q5T5D7 378 aa18.92■□□□□ 0.62
COL9A3-213ENST00000489045 HAGHLQ6PII5 290 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-213ENST00000489045 PIP4P2Q8N4L2 257 aa18.92■□□□□ 0.62
COL9A3-213ENST00000489045 SSMEM1Q8WWF3 244 aa18.92■□□□□ 0.62
COL9A3-213ENST00000489045 OR52A1Q9UKL2 312 aa18.92■□□□□ 0.62
COL9A3-213ENST00000489045 POMT1Q9Y6A1 747 aa18.92■□□□□ 0.62
COL9A3-213ENST00000489045 IGKV1D-17A0A075B6S4 117 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 POM121CA8CG34 1229 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 NRASP01111 189 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 PSG2P11465 335 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 NDUFB7P17568 137 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 POLR2IP36954 125 aaKnown RBP18.91■□□□□ 0.62
COL9A3-213ENST00000489045 GABRA2P47869 451 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 EGR3Q06889 387 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 SSX6Q7RTT6 188 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 ELMOD2Q8IZ81 293 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 Q8N7P7 452 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 ZNF671Q8TAW3 534 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 TBX5Q99593 518 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 ZNF222Q9UK12 451 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 OAZ3Q9UMX2 235 aa18.91■□□□□ 0.62
COL9A3-213ENST00000489045 CIB2O75838 187 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 CRYBA1P05813 215 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 DLX1P56177 255 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 CAV3P56539 151 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 CLVS2Q5SYC1 327 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 METAP1DQ6UB28 335 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-213ENST00000489045 TBC1D15Q8TC07 691 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 CENPNQ96H22 339 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-213ENST00000489045 GABARAPL3Q9BY60 117 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 RIBC2Q9H4K1 309 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 ELL3Q9HB65 397 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-213ENST00000489045 GPR173Q9NS66 373 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 WARS2Q9UGM6 360 aaKnown RBP18.9■□□□□ 0.62
COL9A3-213ENST00000489045 SNX5Q9Y5X3 404 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 V9GYS6 101 aa18.9■□□□□ 0.62
COL9A3-213ENST00000489045 A0A1B0GTI1 187 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 SAC3D1A6NKF1 404 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 RNASEK-C17orf49H0YIS7 233 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 RPP14O95059 124 aaKnown RBP18.89■□□□□ 0.61
COL9A3-213ENST00000489045 APOL3O95236 402 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 IGHV4-59P01825 116 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 RAG2P55895 527 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 KLRD1Q13241 179 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 TMEM42Q69YG0 159 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 LDLRAD3Q86YD5 345 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 YIPF7Q8N8F6 280 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 ZNRF1Q8ND25 227 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 TMEM185AQ8NFB2 350 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 OR14K1Q8NGZ2 314 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 SLC22A13Q9Y226 551 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 MAB21L2Q9Y586 359 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 MMP24Q9Y5R2 645 aa18.89■□□□□ 0.61
COL9A3-213ENST00000489045 A0A1W2PQ09 198 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 SYNGR1O43759 233 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 KRT8P05787 483 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 HTR1FP30939 366 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 HAAOP46952 286 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 RELBQ01201 579 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 PRR31Q5SQ13 230 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 ACP7Q6ZNF0 438 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 POC1AQ8NBT0 407 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 OR4F5Q8NH21 305 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 ZNF488Q96MN9 340 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 RASL12Q9NYN1 266 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 C1RLQ9NZP8 487 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 FAM96BQ9Y3D0 163 aa18.88■□□□□ 0.61
COL9A3-213ENST00000489045 A0A1W2PQL4 384 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-213ENST00000489045 A6NIN4 97 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 J3QT63 122 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 DLGAP1O14490 977 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 IER3P46695 156 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 GUCA2AQ02747 115 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms