RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 POLDIP2Q9Y2S7 368 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 IRGMA1A4Y4 181 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 ANKRD61A6NGH8 418 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 A6NIN4 97 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 ANKRD65E5RJM6 399 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 H3BSH0 61 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 DVL1O14640 695 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 TNFRSF13BO14836 293 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-218ENST00000489037 RPSAP08865 295 aaKnown RBP11.88□□□□□ -0.51
BRCA1-218ENST00000489037 PPIAL4GP0DN37 164 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 HAAOP46952 286 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 OR12D2P58182 307 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 ISL1P61371 349 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 MRPL28Q13084 256 aaKnown RBP11.88□□□□□ -0.51
BRCA1-218ENST00000489037 GALEQ14376 348 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 LRRC10Q5BKY1 277 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 TMEM42Q69YG0 159 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 RBMS3Q6XE24 437 aaKnown RBP11.88□□□□□ -0.51
BRCA1-218ENST00000489037 Q6ZSR3 168 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 LHFPL3Q86UP9 236 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 OR2G2Q8NGZ5 317 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 ST8SIA4Q92187 359 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 MED30Q96HR3 178 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 C4orf36Q96KX1 117 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 RASSF4Q9H2L5 321 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 SNTG1Q9NSN8 517 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 RASL12Q9NYN1 266 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 NLKQ9UBE8 527 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 MXRA5Q9NR99 2828 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 SVEP1Q4LDE5 3571 aa11.88□□□□□ -0.51
BRCA1-218ENST00000489037 LOC107986453A0A1B0GWG9 222 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 GPR37O15354 613 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 OCM2P0CE71 109 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 OCMP0CE72 109 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-218ENST00000489037 ZNF20P17024 532 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 PEX2P28328 305 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 GABRA2P47869 451 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 CCR9P51686 369 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 PAX2Q02962 417 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 DMRTC1Q5HYR2 192 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 FDX2Q6P4F2 183 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 SYS1Q8N2H4 156 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 PRSS35Q8N3Z0 413 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 OR5T2Q8NGG2 359 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 HAVCR2Q8TDQ0 301 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 PP6455Q8WZ26 134 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 AQP3Q92482 292 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 FGF23Q9GZV9 251 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-218ENST00000489037 MS4A7Q9GZW8 240 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-218ENST00000489037 DCLRE1BQ9H816 532 aa11.87□□□□□ -0.51
BRCA1-218ENST00000489037 MRPS18AQ9NVS2 196 aaKnown RBP11.87□□□□□ -0.51
BRCA1-218ENST00000489037 FAM230AA0A1W2PPH8 454 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 OR2AT4A6NND4 320 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-218ENST00000489037 J3QT63 122 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 RHBDL1O75783 438 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 IGHA1P01876 353 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 KIR3DL2P43630 455 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 FUT6P51993 359 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 GBX2P52951 348 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-218ENST00000489037 IL13RA1P78552 427 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 IKZF1Q13422 519 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 IL18R1Q13478 541 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 MED21Q13503 144 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 ALKBH1Q13686 389 aaKnown RBP11.86□□□□□ -0.51
BRCA1-218ENST00000489037 CNN3Q15417 329 aaKnown RBP11.86□□□□□ -0.51
BRCA1-218ENST00000489037 SMIM21Q3B7S5 101 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 ATPAF1Q5TC12 328 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-218ENST00000489037 ZNF691Q5VV52 312 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 METTL11BQ5VVY1 283 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 STUMQ69YW2 141 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 USP43Q70EL4 1123 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 BTN2A1Q7KYR7 527 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 ZNF676Q8N7Q3 588 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 OR52I1Q8NGK6 324 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 SPATA3Q8NHX4 192 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 TRMT10AQ8TBZ6 339 aaKnown RBP11.86□□□□□ -0.51
BRCA1-218ENST00000489037 UPRTQ96BW1 309 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 SEH1LQ96EE3 360 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 BORCS8Q96FH0 119 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 WDR13Q9H1Z4 485 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 NEK6Q9HC98 313 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 CHCHD3Q9NX63 227 aaKnown RBP11.86□□□□□ -0.51
BRCA1-218ENST00000489037 ERVK13-1Q9NX77 482 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 FRRS1LQ9P0K9 344 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 HHLA2Q9UM44 414 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 MYRFQ9Y2G1 1151 aa11.86□□□□□ -0.51
BRCA1-218ENST00000489037 PQLC2LA1A4F0 135 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 ZNF879B4DU55 563 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 C22orf46C9J442 243 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 RGS9O75916 674 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-218ENST00000489037 FSHBP01225 129 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 ISG15P05161 165 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 CCDC159P0C7I6 412 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 FGF12P61328 243 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 TMPRSS11AQ6ZMR5 421 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 RDH10Q8IZV5 341 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 FAM216BQ8N7L0 139 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 POC1AQ8NBT0 407 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 NPRL2Q8WTW4 380 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms