RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SLAMF6Q96DU3 332 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 C20orf85Q9H1P6 137 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 C1orf198Q9H425 327 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 TAS2R4Q9NYW5 299 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 TMEM269A0A1B0GVZ9 245 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 GGT3PA6NGU5 568 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 PRAF2O60831 178 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 COX5BP10606 129 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 APLNRP35414 380 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 TBC1D28Q2M2D7 210 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 SLC22A25Q6T423 547 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 RHOUQ7L0Q8 258 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.65■□□□□ 0.26
CCM2-216ENST00000488727 OR6M1Q8NGM8 313 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 OR13C3Q8NGS6 347 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 OR1F12Q8NHA8 337 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 CLEC4MQ9H2X3 399 aaPredicted RBP16.65■□□□□ 0.26
CCM2-216ENST00000488727 DIABLOQ9NR28 239 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 LRBAP50851 2863 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 RAI1Q7Z5J4 1906 aaPredicted RBP16.65■□□□□ 0.26
CCM2-216ENST00000488727 UNC79Q9P2D8 2635 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 LOC390937A0A1W2PQ73 354 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 C5orf49A4QMS7 147 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 GMDSO60547 372 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 DBHP09172 617 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 CCNOP22674 350 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 HGFACQ04756 655 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 RSPO1Q2MKA7 263 aaPredicted RBP16.65■□□□□ 0.26
CCM2-216ENST00000488727 C2orf76Q3KRA6 126 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 TMEM200AQ86VY9 491 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 NKAIN3Q8N8D7 197 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 RADILQ96JH8 1075 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 MOB1AQ9H8S9 216 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 KLK11Q9UBX7 282 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 ATPIF1Q9UII2 106 aa16.65■□□□□ 0.26
CCM2-216ENST00000488727 TMEM272A0A1B0GTI8 110 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 H7C417 338 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 PEX14O75381 377 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 SSTR2P30874 369 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 RCVRNP35243 200 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 EFNB2P52799 333 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 TMEM255AQ5JRV8 349 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 ELMOD2Q8IZ81 293 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 GIMAP1Q8WWP7 306 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 TMEM246Q9BRR3 403 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 TAS2R8Q9NYW2 309 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 MRPL15Q9P015 296 aaKnown RBP16.64■□□□□ 0.25
CCM2-216ENST00000488727 MTFP1Q9UDX5 166 aa16.64■□□□□ 0.25
CCM2-216ENST00000488727 HTR2CP28335 458 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 WNT5AP41221 380 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 CAPZA1P52907 286 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 SSBP1Q04837 148 aaKnown RBP16.63■□□□□ 0.25
CCM2-216ENST00000488727 KRTAP27-1Q3LI81 207 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 C1orf100Q5SVJ3 147 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 LYPD6Q86Y78 171 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 PLPP7Q8NBV4 271 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 OR1J2Q8NGS2 313 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 FOXRED1Q96CU9 486 aaPredicted RBP16.63■□□□□ 0.25
CCM2-216ENST00000488727 CDH20Q9HBT6 801 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 PLSCR3Q9NRY6 295 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 CENPMQ9NSP4 180 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 PTTG3PQ9NZH4 202 aa16.63■□□□□ 0.25
CCM2-216ENST00000488727 LDLRAD4O15165 306 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 ACSM4P0C7M7 580 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 SULT1A3P0DMM9 295 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 SULT1A4P0DMN0 295 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 MECP2P51608 486 aaKnown RBP16.62■□□□□ 0.25
CCM2-216ENST00000488727 KRTAP10-9P60411 292 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 UTS2BQ765I0 119 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 ZNF101Q8IZC7 436 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 OR11H7Q8NGC8 314 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 PTX4Q96A99 478 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 HYLS1Q96M11 299 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 GON7Q9BXV9 100 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 A0A0A6YYH2 397 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 A6NJ64 397 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 ZNF878C9JN71 531 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 RBBP9O75884 186 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 TTRP02766 147 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 CSF1P09603 554 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 ANXA3P12429 323 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 FAUP35544 74 aaKnown RBP16.62■□□□□ 0.25
CCM2-216ENST00000488727 PSMA6P60900 246 aaKnown RBP16.62■□□□□ 0.25
CCM2-216ENST00000488727 NKX6-1P78426 367 aaPredicted RBP16.62■□□□□ 0.25
CCM2-216ENST00000488727 GALK2Q01415 458 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 ZNF672Q499Z4 452 aaPredicted RBP16.62■□□□□ 0.25
CCM2-216ENST00000488727 BIVMQ86UB2 503 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 OR51B6Q9H340 312 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 PLEKHF2Q9H8W4 249 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 BOLA1Q9Y3E2 137 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 RHBDD3Q9Y3P4 386 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 TACC2O95359 2948 aa16.62■□□□□ 0.25
CCM2-216ENST00000488727 E7EQL1 145 aa16.61■□□□□ 0.25
CCM2-216ENST00000488727 SULT1C2O00338 296 aa16.61■□□□□ 0.25
CCM2-216ENST00000488727 P2RY10O00398 339 aa16.61■□□□□ 0.25
CCM2-216ENST00000488727 PTHLHP12272 177 aa16.61■□□□□ 0.25
CCM2-216ENST00000488727 OTX1P32242 354 aaPredicted RBP16.61■□□□□ 0.25
CCM2-216ENST00000488727 ECH1Q13011 328 aa16.61■□□□□ 0.25
CCM2-216ENST00000488727 SFRP4Q6FHJ7 346 aaPredicted RBP16.61■□□□□ 0.25
CCM2-216ENST00000488727 NUP37Q8NFH4 326 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms