RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 CBLN2Q8IUK8 224 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 HLA-CQ95604 372 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 IMMP1LQ96LU5 166 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 ARPC5LQ9BPX5 153 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 PIGQQ9BRB3 760 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 NELFAQ9H3P2 528 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 CRLF2Q9HC73 371 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 M0R135 149 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 ABCD4O14678 606 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 FBXO24O75426 580 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 GP1BAP07359 652 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 FGF5P12034 268 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 OTX2P32243 289 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 PTGER4P35408 488 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 GUCA1AP43080 201 aaPredicted RBP11.07□□□□□ -0.64
CLIC4-202ENST00000488683 FXYD4P59646 89 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 PIGYQ3MUY2 71 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 TMEM123Q8N131 208 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 FAM89BQ8N5H3 189 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 OR9K2Q8NGE7 335 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 OR56B1Q8NGI3 324 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 TMEM54Q969K7 222 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 SGK3Q96BR1 496 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF799Q96GE5 643 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 REEP6Q96HR9 211 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 ULBP2Q9BZM5 246 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 HRH4Q9H3N8 390 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 PILRBQ9UKJ0 227 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 DMXL1Q9Y485 3027 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 CCDC187A0A096LP49 1063 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 SLC33A1O00400 549 aaPredicted RBP11.07□□□□□ -0.64
CLIC4-202ENST00000488683 TRAPPC6AO75865 159 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 PRF1P14222 555 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 LIFP15018 202 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 CTSSP25774 331 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 LSM6P62312 80 aaKnown RBP11.07□□□□□ -0.64
CLIC4-202ENST00000488683 PAN3Q58A45 887 aaKnown RBP11.07□□□□□ -0.64
CLIC4-202ENST00000488683 C10orf128Q5T292 105 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 TCEAL6Q6IPX3 200 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 TCEAL3Q969E4 200 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 PIK3IP1Q96FE7 263 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 BSCL2Q96G97 398 aaPredicted RBP11.07□□□□□ -0.64
CLIC4-202ENST00000488683 MARS2Q96GW9 593 aaKnown RBP11.07□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF845Q96IR2 970 aaPredicted RBP11.07□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF2Q9BSG1 426 aaPredicted RBP11.07□□□□□ -0.64
CLIC4-202ENST00000488683 CYTL1Q9NRR1 136 aa11.07□□□□□ -0.64
CLIC4-202ENST00000488683 CEACAM18A8MTB9 384 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 TLX3O43711 291 aaPredicted RBP11.06□□□□□ -0.64
CLIC4-202ENST00000488683 ASCL1P50553 236 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 SUCLG1P53597 346 aaKnown RBP11.06□□□□□ -0.64
CLIC4-202ENST00000488683 MTCP1P56278 107 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 ECH1Q13011 328 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF585AQ6P3V2 769 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 LHFPL1Q86WI0 220 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 ARRDC1Q8N5I2 433 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 GJC3Q8NFK1 279 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 WDR54Q9H977 334 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 ZC4H2Q9NQZ6 224 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 PLEKHJ1Q9NW61 149 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 SLC39A1Q9NY26 324 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 DHHO43323 396 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 DHRS3O75911 302 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 SFT2D2O95562 160 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 SERPINA5P05154 406 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 NAT2P11245 290 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 CHRFAM7AQ494W8 412 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 WIPI1Q5MNZ9 446 aaPredicted RBP11.06□□□□□ -0.64
CLIC4-202ENST00000488683 PMS2CLQ68D20 193 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 RPL7L1Q6DKI1 246 aaKnown RBP11.06□□□□□ -0.64
CLIC4-202ENST00000488683 PEG10Q86TG7 708 aaKnown RBP11.06□□□□□ -0.64
CLIC4-202ENST00000488683 LHFPL5Q8TAF8 219 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 S100A13Q99584 98 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 CDC6Q99741 560 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 URM1Q9BTM9 101 aaKnown RBP11.06□□□□□ -0.64
CLIC4-202ENST00000488683 ANGPTL4Q9BY76 406 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 OSGIN2Q9Y236 505 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 V9GYS6 101 aa11.06□□□□□ -0.64
CLIC4-202ENST00000488683 A0A1B0GV50 99 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 RPS2P15880 293 aaKnown RBP11.05□□□□□ -0.64
CLIC4-202ENST00000488683 NME2P22392 152 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 TAS2R31P59538 309 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 SRYQ05066 204 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 PNLIPRP3Q17RR3 467 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 SEMA6DQ8NFY4 1073 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 LDAHQ9H6V9 325 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 FOXD3Q9UJU5 478 aaPredicted RBP11.05□□□□□ -0.64
CLIC4-202ENST00000488683 NXT1Q9UKK6 140 aaKnown RBP11.05□□□□□ -0.64
CLIC4-202ENST00000488683 RFNGQ9Y644 331 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 DIDO1Q9BTC0 2240 aaKnown RBP11.05□□□□□ -0.64
CLIC4-202ENST00000488683 TOR1AO14656 332 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 CXCL13O43927 109 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 LCATP04180 440 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 CCNOP22674 350 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 FPR2P25090 351 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 OTX1P32242 354 aaPredicted RBP11.05□□□□□ -0.64
CLIC4-202ENST00000488683 Q0VFX4 171 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 PHLDA2Q53GA4 152 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 ETV3LQ6ZN32 361 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms