RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 METTL15A6NJ78 407 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 GLRA1P23415 457 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 PRTN3P24158 256 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 C11orf91Q3C1V1 193 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 LRRC10Q5BKY1 277 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 CLVS2Q5SYC1 327 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 OR5A2Q8NGI9 324 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 AQP3Q92482 292 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 UBE2FQ969M7 185 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 HRASLS5Q96KN8 279 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 DNTTIP1Q9H147 329 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 PLEKHA1Q9HB21 404 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 ACOXLQ9NUZ1 547 aa14.66□□□□□ -0.06
ITGB1-215ENST00000488494 A6NIN4 97 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 OR2AT4A6NND4 320 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 H3BSH0 61 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 EBAG9O00559 213 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 ENTPD6O75354 484 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 CCL1P22362 96 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 TGM4P49221 684 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 COMPP49747 757 aaPredicted RBP14.65□□□□□ -0.06
ITGB1-215ENST00000488494 ARF6P62330 175 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 IL13RA1P78552 427 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 ZNF85Q03923 595 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 SLC9A3R2Q15599 337 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 DGUOKQ16854 277 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 DEFB112Q30KQ8 113 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 ATPAF1Q5TC12 328 aaPredicted RBP14.65□□□□□ -0.06
ITGB1-215ENST00000488494 TMEM42Q69YG0 159 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 ZNF788Q6ZQV5 615 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 FAM220AQ7Z4H9 259 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 CATSPERDQ86XM0 798 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 OR14K1Q8NGZ2 314 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 ANGPTL6Q8NI99 470 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 H1FXQ92522 213 aaKnown RBP14.65□□□□□ -0.06
ITGB1-215ENST00000488494 RORBQ92753 470 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 LHX4Q969G2 390 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 TMIGD2Q96BF3 282 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 MBOAT4Q96T53 435 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 GNG8Q9UK08 70 aa14.65□□□□□ -0.06
ITGB1-215ENST00000488494 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.65□□□□□ -0.064e-6■■□□□ 13.2
ITGB1-215ENST00000488494 IGKV1D-17A0A075B6S4 117 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 CENPVL3A0A0U1RRI6 287 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 A0A1B0GVI7 797 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 DHRS7CA6NNS2 312 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 J3QT63 122 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 DLGAP1O14490 977 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 SIGLEC5O15389 551 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 SULT1C4O75897 302 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 RNASE1P07998 156 aaKnown RBP14.64□□□□□ -0.07
ITGB1-215ENST00000488494 CFPP27918 469 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 HAAOP46952 286 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 GABRA2P47869 451 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 PDCD1Q15116 288 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 CDONQ4KMG0 1287 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 TP53I3Q53FA7 332 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 VMO1Q7Z5L0 202 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 TRUB1Q8WWH5 349 aaKnown RBP14.64□□□□□ -0.07
ITGB1-215ENST00000488494 GATAD2BQ8WXI9 593 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 SLC25A28Q96A46 364 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 RNFT2Q96EX2 444 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 ZNF488Q96MN9 340 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 SLC25A10Q9UBX3 287 aaPredicted RBP14.64□□□□□ -0.07
ITGB1-215ENST00000488494 KPTNQ9Y664 436 aa14.64□□□□□ -0.07
ITGB1-215ENST00000488494 NBEAL1Q6ZS30 2694 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 IGHV1-69DA0A0B4J2H0 117 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 LOC107986453A0A1B0GWG9 222 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 PQLC2LA1A4F0 135 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 ANKRD61A6NGH8 418 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 CLDN34H7C241 214 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 HOXA3O43365 443 aaPredicted RBP14.63□□□□□ -0.07
ITGB1-215ENST00000488494 SYNGR1O43759 233 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 IGHV1-69P01742 117 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 BPIFB3P59826 476 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 SNRPGP62308 76 aaKnown RBP14.63□□□□□ -0.07
ITGB1-215ENST00000488494 ACTC1P68032 377 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 ACTA1P68133 377 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 SMIM21Q3B7S5 101 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 AWAT1Q58HT5 328 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 Q6ZSR3 168 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 ZNF573Q86YE8 665 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 PDZD9Q8IXQ8 264 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 PRSS35Q8N3Z0 413 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 KIR3DL3Q8N743 410 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 C3orf56Q8N813 242 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 POC1AQ8NBT0 407 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 LY6G5BQ8NDX9 201 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 ZNF671Q8TAW3 534 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 NPRL2Q8WTW4 380 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 ZDHHC16Q969W1 377 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 MED30Q96HR3 178 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 DCTN5Q9BTE1 182 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 C9orf16Q9BUW7 83 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 CNTD2Q9H8S5 307 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 ELL3Q9HB65 397 aaPredicted RBP14.63□□□□□ -0.07
ITGB1-215ENST00000488494 S100A14Q9HCY8 104 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 ZNF222Q9UK12 451 aa14.63□□□□□ -0.07
ITGB1-215ENST00000488494 E9PQ18 207 aa14.62□□□□□ -0.07
ITGB1-215ENST00000488494 GPR37O15354 613 aa14.62□□□□□ -0.07
ITGB1-215ENST00000488494 SYT7O43581 403 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms