RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 RPP21Q9H633 154 aaKnown RBP2.45□□□□□ -2.02
ITGB1-214ENST00000488427 ZNF430Q9H8G1 570 aaPredicted RBP2.45□□□□□ -2.02
ITGB1-214ENST00000488427 SLC40A1Q9NP59 571 aa2.45□□□□□ -2.02
ITGB1-214ENST00000488427 HMG20AQ9NP66 347 aa2.45□□□□□ -2.02
ITGB1-214ENST00000488427 RAB18Q9NP72 206 aa2.45□□□□□ -2.02
ITGB1-214ENST00000488427 SLCO1B3Q9NPD5 702 aa2.45□□□□□ -2.02
ITGB1-214ENST00000488427 POLE4Q9NR33 117 aa2.45□□□□□ -2.02
ITGB1-214ENST00000488427 FAM49BQ9NUQ9 324 aa2.45□□□□□ -2.02
ITGB1-214ENST00000488427 DHCR7Q9UBM7 475 aaKnown RBP2.45□□□□□ -2.02
ITGB1-214ENST00000488427 TMEM14AQ9Y6G1 99 aa2.45□□□□□ -2.02
ITGB1-214ENST00000488427 HECTD4Q9Y4D8 3996 aa2.45□□□□□ -2.02
ITGB1-214ENST00000488427 TRAV39A0A0B4J263 110 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 OR5K4A6NMS3 321 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 E7EQ34 232 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 F5H5T6 163 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 BCKDKO14874 412 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 IGKV1-17P01599 117 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 IGLV3-27P01718 113 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 TNNC2P02585 160 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 NSG1P42857 185 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 NPBWR2P48146 333 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 ATP1B3P54709 279 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 VSX2P58304 361 aaPredicted RBP2.44□□□□□ -2.02
ITGB1-214ENST00000488427 UBA52P62987 128 aaKnown RBP2.44□□□□□ -2.02
ITGB1-214ENST00000488427 UBE2IP63279 158 aaKnown RBP2.44□□□□□ -2.02
ITGB1-214ENST00000488427 DEFB121Q5J5C9 76 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 HES5Q5TA89 166 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 TRIM40Q6P9F5 258 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 ENPP6Q6UWR7 440 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 CCDC73Q6ZRK6 1079 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 THOC6Q86W42 341 aaKnown RBP2.44□□□□□ -2.02
ITGB1-214ENST00000488427 ZNF615Q8N8J6 731 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 GPATCH11Q8N954 259 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 OR6K2Q8NGY2 324 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 OR2G2Q8NGZ5 317 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 LKAAEAR1Q8TD35 194 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 GSDMAQ96QA5 445 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 OR8B4Q96RC9 309 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 SH3GL1Q99961 368 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 UTP23Q9BRU9 249 aaKnown RBP2.44□□□□□ -2.02
ITGB1-214ENST00000488427 TMEM43Q9BTV4 400 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 TIPINQ9BVW5 301 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 SUCNR1Q9BXA5 334 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 TM6SF2Q9BZW4 377 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 ISYNA1Q9NPH2 558 aa2.44□□□□□ -2.02
ITGB1-214ENST00000488427 ZNF629Q9UEG4 869 aaPredicted RBP2.44□□□□□ -2.02
ITGB1-214ENST00000488427 ARFGEF3Q5TH69 2177 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 C7orf66A4D0T2 115 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 FCMRO60667 390 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 RCBTB2O95199 551 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 CRYGSP22914 178 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 PRPHP41219 470 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 RAP1AP62834 184 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 LY6EQ16553 131 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 COX19Q49B96 90 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 NKAIN1Q4KMZ8 207 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 PDZK1Q5T2W1 519 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 SLC25A25Q6KCM7 469 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 SHISA6Q6ZSJ9 500 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 NDUFAF7Q7L592 441 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 NEGR1Q7Z3B1 354 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 HMGN2P46Q86SG4 172 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 PIANPQ8IYJ0 282 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 C12orf29Q8N999 325 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 OR52K2Q8NGK3 314 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 OR5W2Q8NH69 310 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.43□□□□□ -2.02
ITGB1-214ENST00000488427 SGK3Q96BR1 496 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 C10orf35Q96D05 121 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 B9D2Q9BPU9 175 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 MED18Q9BUE0 208 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 PPA2Q9H2U2 334 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 HEATR1Q9H583 2144 aaKnown RBP2.43□□□□□ -2.02
ITGB1-214ENST00000488427 WDR54Q9H977 334 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 NMRAL1Q9HBL8 299 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 ZNRD1Q9P1U0 126 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 RPUSD1Q9UJJ7 312 aaKnown RBP2.43□□□□□ -2.02
ITGB1-214ENST00000488427 PIGLQ9Y2B2 252 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 SLC17A4Q9Y2C5 497 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 OR51B4Q9Y5P0 310 aa2.43□□□□□ -2.02
ITGB1-214ENST00000488427 DOCK11Q5JSL3 2073 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 ZNF208O43345 1280 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 REM1O75628 298 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 RAB3DO95716 219 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 APOEP02649 317 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 RHOCP08134 193 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 COX6A1P12074 109 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 GABRA1P14867 456 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 MUC1P15941 1255 aaPredicted RBP2.42□□□□□ -2.02
ITGB1-214ENST00000488427 CCT6AP40227 531 aaKnown RBP2.42□□□□□ -2.02
ITGB1-214ENST00000488427 RFC3P40938 356 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 MAGEA8P43361 318 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 RAD51Q06609 339 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 STK11Q15831 433 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 TAF9Q16594 264 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 RSPO1Q2MKA7 263 aaPredicted RBP2.42□□□□□ -2.02
ITGB1-214ENST00000488427 PYCR3Q53H96 274 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 THEM4Q5T1C6 240 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 ZFAND6Q6FIF0 208 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms