RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 FDX2Q6P4F2 183 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 RDH10Q8IZV5 341 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 CCDC54Q8NEL0 328 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 OR52I1Q8NGK6 324 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 ZNF671Q8TAW3 534 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 AQP3Q92482 292 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 C12orf43Q96C57 262 aaKnown RBP11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 PELI1Q96FA3 418 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 NUDT16L1Q9BRJ7 211 aaKnown RBP11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 ALG8Q9BVK2 526 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 DCLRE1BQ9H816 532 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 MRPS18AQ9NVS2 196 aaKnown RBP11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 KAAG1Q9UBP8 84 aa11.78□□□□□ -0.52
PFKFB3-213ENST00000487989 PQLC2LA1A4F0 135 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 ANKRD61A6NGH8 418 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 RNF212BA8MTL3 300 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 CASQ2O14958 399 aaPredicted RBP11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 TCF21O43680 179 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 HAAOP46952 286 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 NANOS3P60323 173 aaKnown RBP11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 ADARB1P78563 741 aaKnown RBP11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 SRSF2Q01130 221 aaKnown RBP11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 ARMCX4Q5H9R4 360 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 TMEM244Q5VVB8 128 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 HAGHLQ6PII5 290 aaPredicted RBP11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 ZNF573Q86YE8 665 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 SYS1Q8N2H4 156 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 SETD9Q8NE22 299 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 CNIH3Q8TBE1 160 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 TMEM158Q8WZ71 300 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 DACT3Q96B18 629 aaPredicted RBP11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 ISG20L2Q9H9L3 353 aaKnown RBP11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 SMURF1Q9HCE7 757 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 INPP5EQ9NRR6 644 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 SNTG1Q9NSN8 517 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 ERVK13-1Q9NX77 482 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 SLC7A11Q9UPY5 501 aa11.77□□□□□ -0.53
PFKFB3-213ENST00000487989 FAM230AA0A1W2PPH8 454 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 ERICH4A6NGS2 130 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 C22orf46C9J442 243 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 ENSAO43768 121 aaKnown RBP11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 SERPINA3P01011 423 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 FSHBP01225 129 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 GLRA1P23415 457 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 CCR9P51686 369 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 UBE2V2Q15819 145 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 ATPAF1Q5TC12 328 aaPredicted RBP11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 STUMQ69YW2 141 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 SLC36A1Q7Z2H8 476 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 EGFL6Q8IUX8 553 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 ST8SIA4Q92187 359 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 TMIGD2Q96BF3 282 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 ZNF649Q9BS31 505 aa11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 FGF20Q9NP95 211 aaPredicted RBP11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 NKX1-2Q9UD57 310 aaPredicted RBP11.76□□□□□ -0.53
PFKFB3-213ENST00000487989 A0A1B0GW55 424 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 OR2AT4A6NND4 320 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 J3QT63 122 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 NDUFB3O43676 98 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 FCN3O75636 299 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 GATBO75879 557 aaKnown RBP11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 RGS9O75916 674 aaPredicted RBP11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 ISG15P05161 165 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 DUX4L2P0CJ85 424 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 DUX4L3P0CJ86 424 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 DUX4L4P0CJ87 422 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 DUX4L5P0CJ88 424 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 DUX4L6P0CJ89 424 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 DUX4L7P0CJ90 424 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 AMY2BP19961 511 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 TGM4P49221 684 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 GBX2P52951 348 aaPredicted RBP11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 SLC34A1Q06495 639 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 IKZF1Q13422 519 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 IL18R1Q13478 541 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 ALKBH1Q13686 389 aaKnown RBP11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 DUX4L9Q6RFH8 374 aaPredicted RBP11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 BTN2A1Q7KYR7 527 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 FAM216BQ8N7L0 139 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 ZNF676Q8N7Q3 588 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 TRMT10AQ8TBZ6 339 aaKnown RBP11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 ZNF418Q8TF45 676 aaPredicted RBP11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 NPRL2Q8WTW4 380 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 C10orf35Q96D05 121 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 MED30Q96HR3 178 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 CHST5Q9GZS9 411 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 VCXQ9H320 206 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 NLKQ9UBE8 527 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 DUX4Q9UBX2 424 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 NUP50Q9UKX7 468 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 WNK2Q9Y3S1 2297 aa11.75□□□□□ -0.53
PFKFB3-213ENST00000487989 IRGMA1A4Y4 181 aa11.74□□□□□ -0.53
PFKFB3-213ENST00000487989 NKX6-3A6NJ46 265 aa11.74□□□□□ -0.53
PFKFB3-213ENST00000487989 OR4C45A6NMZ5 311 aa11.74□□□□□ -0.53
PFKFB3-213ENST00000487989 E9PI62 339 aa11.74□□□□□ -0.53
PFKFB3-213ENST00000487989 H0YAE9 185 aa11.74□□□□□ -0.53
PFKFB3-213ENST00000487989 SYNGR1O43759 233 aa11.74□□□□□ -0.53
PFKFB3-213ENST00000487989 ECDO95905 644 aaPredicted RBP11.74□□□□□ -0.53
PFKFB3-213ENST00000487989 TFF1P04155 84 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms