RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 CSNK2A3Q8NEV1 391 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 OR5D18Q8NGL1 313 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 OR5L1Q8NGL2 311 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 GPX8Q8TED1 209 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 TNFAIP8L1Q8WVP5 186 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 PPP1R14BQ96C90 147 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 TMEM59Q9BXS4 323 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 CST11Q9H112 138 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 MMP28Q9H239 520 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 SCPEP1Q9HB40 452 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 KCNJ16Q9NPI9 418 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 NLKQ9UBE8 527 aa12.2□□□□□ -0.46
CUX1-209ENST00000487284 HCFC1P51610 2035 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 IGKV1-27A0A075B6S5 117 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 WIPF3A6NGB9 483 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 CST4P01036 141 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 GSTT2BP0CG30 244 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 GRNP28799 593 aaKnown RBP12.19□□□□□ -0.46
CUX1-209ENST00000487284 RBP2P50120 134 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 FUT6P51993 359 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 MTCP1P56278 107 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 HLXQ14774 488 aaPredicted RBP12.19□□□□□ -0.46
CUX1-209ENST00000487284 TIMM23BQ5SRD1 257 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 PLCXD3Q63HM9 321 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 PLET1Q6UQ28 207 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 ASCL4Q6XD76 172 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 C22orf34Q6ZV56 151 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 DEDD2Q8WXF8 326 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 AQP3Q92482 292 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 PIGCQ92535 297 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 RNASE6Q93091 150 aaKnown RBP12.19□□□□□ -0.46
CUX1-209ENST00000487284 BORCS8Q96FH0 119 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 GAL3ST1Q99999 423 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 CDH20Q9HBT6 801 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 SLC7A11Q9UPY5 501 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 AMDHD2Q9Y303 409 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 SLC25A15Q9Y619 301 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 DOPEY1Q5JWR5 2465 aa12.19□□□□□ -0.46
CUX1-209ENST00000487284 A0A0A6YYD4 124 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 FAM230AA0A1W2PPH8 454 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 RBBP9O75884 186 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 MPIG6BO95866 241 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 CHRM2P08172 466 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 RPS27AP62979 156 aaKnown RBP12.18□□□□□ -0.46
CUX1-209ENST00000487284 GUCA2AQ02747 115 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 ZNF260Q3ZCT1 412 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 SLC22A6Q4U2R8 563 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 OLFML2AQ68BL7 652 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 MOB3CQ70IA8 216 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 GLCCI1Q86VQ1 547 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 FTMTQ8N4E7 242 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 ZNF808Q8N4W9 903 aaPredicted RBP12.18□□□□□ -0.46
CUX1-209ENST00000487284 FAM89BQ8N5H3 189 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 FAM169BQ8N8A8 192 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 OR10R2Q8NGX6 335 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 CHAC2Q8WUX2 184 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 SEH1LQ96EE3 360 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 NEURL2Q9BR09 285 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 MARVELD1Q9BSK0 173 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 URM1Q9BTM9 101 aaKnown RBP12.18□□□□□ -0.46
CUX1-209ENST00000487284 C1QTNF6Q9BXI9 259 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 TAS2R8Q9NYW2 309 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 ANKHD1Q8IWZ3 2542 aaKnown RBP12.18□□□□□ -0.46
CUX1-209ENST00000487284 A0A1W2PP11 408 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 NAP1L6A6NFF2 107 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 CD300LBA8K4G0 201 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 ZNF850A8MQ14 1090 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 SMPD2O60906 423 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 CRTAPO75718 401 aaPredicted RBP12.18□□□□□ -0.46
CUX1-209ENST00000487284 CLDN14O95500 239 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 IGLV1-44P01699 117 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 LPLP06858 475 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 MELTFP08582 738 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 MGMTP16455 207 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 AGAP20933 346 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 VEGFCP49767 419 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 ATP1B3P54709 279 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 TFF3Q07654 80 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 PRDX4Q13162 271 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 SNTB2Q13425 540 aaKnown RBP12.18□□□□□ -0.46
CUX1-209ENST00000487284 ALKBH2Q6NS38 261 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 FBXW12Q6X9E4 464 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 UPRTQ96BW1 309 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 NICN1Q9BSH3 213 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 PAPOLGQ9BWT3 736 aaKnown RBP12.18□□□□□ -0.46
CUX1-209ENST00000487284 TM2D1Q9BX74 207 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 DPAGT1Q9H3H5 408 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 BANF2Q9H503 90 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 HRASLSQ9HDD0 168 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 CRIM1Q9NZV1 1036 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 EIF3KQ9UBQ5 218 aaKnown RBP12.18□□□□□ -0.46
CUX1-209ENST00000487284 GPR160Q9UJ42 338 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 ING4Q9UNL4 249 aa12.18□□□□□ -0.46
CUX1-209ENST00000487284 A0A0B4J293 547 aa12.17□□□□□ -0.46
CUX1-209ENST00000487284 MT-ND4P03905 459 aa12.17□□□□□ -0.46
CUX1-209ENST00000487284 CSF1P09603 554 aa12.17□□□□□ -0.46
CUX1-209ENST00000487284 TMEM225BP0DP42 221 aa12.17□□□□□ -0.46
CUX1-209ENST00000487284 ACTBP60709 375 aa12.17□□□□□ -0.46
CUX1-209ENST00000487284 PPP1CBP62140 327 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms