RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 GRINAQ7Z429 371 aa10.9□□□□□ -0.66
HSPG2-211ENST00000486901 SULF2Q8IWU5 870 aa10.9□□□□□ -0.66
HSPG2-211ENST00000486901 ZFP62Q8NB50 900 aaPredicted RBP10.9□□□□□ -0.66
HSPG2-211ENST00000486901 POC1AQ8NBT0 407 aa10.9□□□□□ -0.66
HSPG2-211ENST00000486901 RNF133Q8WVZ7 376 aa10.9□□□□□ -0.66
HSPG2-211ENST00000486901 SLC39A7Q92504 469 aa10.9□□□□□ -0.66
HSPG2-211ENST00000486901 KLHDC7BQ96G42 594 aa10.9□□□□□ -0.66
HSPG2-211ENST00000486901 OR10A2Q9H208 303 aa10.9□□□□□ -0.66
HSPG2-211ENST00000486901 THADAQ6YHU6 1953 aa10.9□□□□□ -0.66
HSPG2-211ENST00000486901 BPNT1O95861 308 aa10.9□□□□□ -0.67
HSPG2-211ENST00000486901 SULT1A1P50225 295 aa10.9□□□□□ -0.67
HSPG2-211ENST00000486901 ECH1Q13011 328 aa10.9□□□□□ -0.67
HSPG2-211ENST00000486901 H1FNTQ75WM6 255 aaPredicted RBP10.9□□□□□ -0.67
HSPG2-211ENST00000486901 PRO1933Q9H354 126 aa10.9□□□□□ -0.67
HSPG2-211ENST00000486901 LIME1Q9H400 295 aa10.9□□□□□ -0.67
HSPG2-211ENST00000486901 B3GALT5Q9Y2C3 310 aa10.9□□□□□ -0.67
HSPG2-211ENST00000486901 CACNA1DQ01668 2161 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 OR5H15A6NDH6 313 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 FRG2CA6NGY1 282 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 TMEM14DPA8MWL7 114 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 HSPB6O14558 160 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 EFNA2O43921 213 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 FOLR1P15328 257 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 RAB5AP20339 215 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 LAP3P28838 519 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 SLC6A8P48029 635 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 GABRA4P48169 554 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 CLEC12BQ2HXU8 276 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 OR52M1Q8NGK5 317 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 STT3BQ8TCJ2 826 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 TCTN2Q96GX1 697 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 PGAM5Q96HS1 289 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 SMIM8Q96KF7 97 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 PIGQQ9BRB3 760 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 VN1R1Q9GZP7 353 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 ALG1L2C9J202 215 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 MASP2O00187 686 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 EIF1BO60739 113 aaKnown RBP10.89□□□□□ -0.67
HSPG2-211ENST00000486901 EIF1P41567 113 aaKnown RBP10.89□□□□□ -0.67
HSPG2-211ENST00000486901 RGS19P49795 217 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 IGLV3-21P80748 117 aaPredicted RBP10.89□□□□□ -0.67
HSPG2-211ENST00000486901 SRSF4Q08170 494 aaKnown RBP10.89□□□□□ -0.67
HSPG2-211ENST00000486901 TOMM20Q15388 145 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 KISS1Q15726 138 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 ZNF529Q6P280 563 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 C5orf46Q6UWT4 87 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 BTNL8Q6UX41 500 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 LYPD6Q86Y78 171 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 PRRX2Q99811 253 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 GABRG3Q99928 467 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 SERINC1Q9NRX5 453 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 GPR173Q9NS66 373 aa10.89□□□□□ -0.67
HSPG2-211ENST00000486901 IGKV3-11P04433 115 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 IFNA4P05014 189 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 OR5AC1P0C628 307 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 ZNF17P17021 662 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 HLA-GP17693 338 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 DVL1P1P54792 670 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-211ENST00000486901 PIGPP57054 158 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 TAS2R31P59538 309 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 TMEM156Q8N614 296 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 KCNK17Q96T54 332 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 CNTNAP3Q9BZ76 1288 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 RAB18Q9NP72 206 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 MYOZ1Q9NP98 299 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-211ENST00000486901 CD207Q9UJ71 328 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 TNFRSF10CO14798 259 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 NUDT21O43809 227 aaKnown RBP10.88□□□□□ -0.67
HSPG2-211ENST00000486901 MT-ATP6P00846 226 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 IFNA2P01563 188 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 CAPZBP47756 277 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 MYBPHQ13203 477 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 KIAA0141Q14154 515 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-211ENST00000486901 PCK2Q16822 640 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 PHF19Q5T6S3 580 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 PEG10Q86TG7 708 aaKnown RBP10.88□□□□□ -0.67
HSPG2-211ENST00000486901 OR1L3Q8NH93 324 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 KCNG3Q8TAE7 436 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 ZNF251Q9BRH9 671 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 KCNJ16Q9NPI9 418 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 TINAGQ9UJW2 476 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 NPIPB7O75200 414 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 CD5P06127 495 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 QDPRP09417 244 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 RNF224P0DH78 156 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 CSNK1EP49674 416 aaKnown RBP10.88□□□□□ -0.67
HSPG2-211ENST00000486901 MMP16P51512 607 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 ZNF674Q2M3X9 581 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 C10orf91Q5T1B1 145 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 C1orf147Q96MC9 270 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-211ENST00000486901 AQP10Q96PS8 301 aa10.88□□□□□ -0.67
HSPG2-211ENST00000486901 LOC390937A0A1W2PQ73 354 aa10.87□□□□□ -0.67
HSPG2-211ENST00000486901 TSPAN2O60636 221 aa10.87□□□□□ -0.67
HSPG2-211ENST00000486901 RABIFP47224 123 aa10.87□□□□□ -0.67
HSPG2-211ENST00000486901 TMEM176BQ3YBM2 270 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-211ENST00000486901 RPUSD3Q6P087 351 aaKnown RBP10.87□□□□□ -0.67
HSPG2-211ENST00000486901 DNM1P34Q6PK57 102 aa10.87□□□□□ -0.67
HSPG2-211ENST00000486901 THRSPQ92748 146 aa10.87□□□□□ -0.67
HSPG2-211ENST00000486901 CRISPLD2Q9H0B8 497 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms