RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 RAB1AP62820 205 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 SRSF6Q13247 344 aaKnown RBP10.35□□□□□ -0.75
PKP4-213ENST00000486254 C3AR1Q16581 482 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 ATPAF1Q5TC12 328 aaPredicted RBP10.35□□□□□ -0.75
PKP4-213ENST00000486254 TFAP2EQ6VUC0 442 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 FAM214BQ7L5A3 538 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 C1QL2Q7Z5L3 287 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 TMEM200AQ86VY9 491 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 HOGA1Q86XE5 327 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 C9orf62Q8N4C0 152 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 ZADH2Q8N4Q0 377 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 OR8S1Q8NH09 359 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 DVL3Q92997 716 aaPredicted RBP10.35□□□□□ -0.75
PKP4-213ENST00000486254 ARHGAP5-AS1Q96IT6 56 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 SLC6A7Q99884 636 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 SEC22CQ9BRL7 303 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 TMEM246Q9BRR3 403 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 CHST6Q9GZX3 395 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 BANF2Q9H503 90 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 ZNF69Q9UC07 566 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 EDARQ9UNE0 448 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 CSAG2Q9Y5P2 127 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 AHRRA9YTQ3 701 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 M0QYG6 137 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 IL2RAP01589 272 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 RLN1P04808 185 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 FCER2P06734 321 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 GSTT2P0CG29 244 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 COX5AP20674 150 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 SERPINA2P20848 420 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 DTYMKP23919 212 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 HRH1P35367 487 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 TAS2R31P59538 309 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 PDZK1IP1Q13113 114 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 ZNF169Q14929 603 aaPredicted RBP10.35□□□□□ -0.75
PKP4-213ENST00000486254 SURF2Q15527 256 aaPredicted RBP10.35□□□□□ -0.75
PKP4-213ENST00000486254 EIF2S3LQ2VIR3 472 aaKnown RBP10.35□□□□□ -0.75
PKP4-213ENST00000486254 DEFB109BQ30KR1 87 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 NHLRC3Q5JS37 347 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 LAMTOR1Q6IAA8 161 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 RPUSD3Q6P087 351 aaKnown RBP10.35□□□□□ -0.75
PKP4-213ENST00000486254 Q6ZT83 130 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 P4HA3Q7Z4N8 544 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 OR5L1Q8NGL2 311 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 ZNF75AQ96N20 296 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 SCGB3A2Q96PL1 93 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 PECRQ9BY49 303 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 MGAT4CQ9UBM8 478 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 EIF3KQ9UBQ5 218 aaKnown RBP10.35□□□□□ -0.75
PKP4-213ENST00000486254 ELF5Q9UKW6 265 aaPredicted RBP10.35□□□□□ -0.75
PKP4-213ENST00000486254 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 CEP250Q9BV73 2442 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 IGKV1-27A0A075B6S5 117 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 A0A1W2PP11 408 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 PQLC2LA1A4F0 135 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 ZNF503-AS2A6NEH8 195 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 RRP8O43159 456 aaKnown RBP10.34□□□□□ -0.75
PKP4-213ENST00000486254 CSTBP04080 98 aaKnown RBP10.34□□□□□ -0.75
PKP4-213ENST00000486254 IFNA6P05013 189 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 OR4E1P0C645 316 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 TMEM225BP0DP42 221 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 HLA-GP17693 338 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 DNASE1P24855 282 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 BLVRBP30043 206 aaPredicted RBP10.34□□□□□ -0.75
PKP4-213ENST00000486254 APLNRP35414 380 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 ECI1P42126 302 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 FOXG1P55316 489 aaPredicted RBP10.34□□□□□ -0.75
PKP4-213ENST00000486254 CXADRP78310 365 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 PMP22Q01453 160 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 SRSF4Q08170 494 aaKnown RBP10.34□□□□□ -0.75
PKP4-213ENST00000486254 RSU1Q15404 277 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 C1QTNF12Q5T7M4 302 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 ELP2Q6IA86 826 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 Q6ZS92 163 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 MRPL21Q7Z2W9 205 aaKnown RBP10.34□□□□□ -0.75
PKP4-213ENST00000486254 SLC25A42Q86VD7 318 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 TMEM17Q86X19 198 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 OR2AK2Q8NG84 335 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 OR4S1Q8NGB4 309 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 OR5D18Q8NGL1 313 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 OR6K3Q8NGY3 331 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 OR4K15Q8NH41 348 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 NPRL2Q8WTW4 380 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 FBXW5Q969U6 566 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 MS4A3Q96HJ5 214 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 PIPOXQ9P0Z9 390 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 PRSS50Q9UI38 385 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 NOP16Q9Y3C1 178 aaKnown RBP10.34□□□□□ -0.75
PKP4-213ENST00000486254 DOCK7Q96N67 2140 aa10.34□□□□□ -0.75
PKP4-213ENST00000486254 A0A096LPE4 126 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 A0A1W2PPZ6 126 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 C5orf49A4QMS7 147 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 FIGNL2A6NMB9 653 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 G3V3Q6 166 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 RAD51DO75771 328 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 CRHP06850 196 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 CD79AP11912 226 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 C4BPBP20851 252 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 TUBG1P23258 451 aa10.33□□□□□ -0.76
PKP4-213ENST00000486254 IKZF1Q13422 519 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms