RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 IFI30P13284 250 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 IDO1P14902 403 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 DDOSTP39656 456 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 CAPZA1P52907 286 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 PIN1Q13526 163 aaPredicted RBP6.4□□□□□ -1.38
XRN1-212ENST00000486211 KRR1Q13601 381 aaKnown RBP6.4□□□□□ -1.38
XRN1-212ENST00000486211 NFYCQ13952 458 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 SRSF7Q16629 238 aaKnown RBP eCLIP6.4□□□□□ -1.38
XRN1-212ENST00000486211 FAM76BQ5HYJ3 339 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 PTCHD4Q6ZW05 846 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 TMPRSS11FQ6ZWK6 438 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 DRAM1Q8N682 238 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 CD177Q8N6Q3 437 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 RNF152Q8N8N0 203 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 OR4P4Q8NGL7 312 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 OR13C2Q8NGS9 318 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 OR2T27Q8NH04 317 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 NDNFQ8TB73 568 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 PKNOX2Q96KN3 472 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 ZNF570Q96NI8 536 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 TSSK2Q96PF2 358 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 OPA3Q9H6K4 179 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 YY1AP1Q9H869 796 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 SP140LQ9H930 580 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 NMNAT1Q9HAN9 279 aaPredicted RBP6.4□□□□□ -1.38
XRN1-212ENST00000486211 RETNQ9HD89 108 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 CYB5R1Q9UHQ9 305 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 KCNG2Q9UJ96 466 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 SIRT4Q9Y6E7 314 aaPredicted RBP6.4□□□□□ -1.38
XRN1-212ENST00000486211 VPS13DQ5THJ4 4388 aa6.4□□□□□ -1.38
XRN1-212ENST00000486211 IGHV2-26A0A0B4J1V2 119 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 HTR3EA5X5Y0 456 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 SERPINE3A8MV23 424 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 MTRF1O75570 445 aaKnown RBP6.39□□□□□ -1.39
XRN1-212ENST00000486211 TNFRSF1BP20333 461 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 PPIBP23284 216 aaKnown RBP6.39□□□□□ -1.39
XRN1-212ENST00000486211 GLRA1P23415 457 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 SLC9A3P48764 834 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 TAS2R41P59536 307 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 SLC35B1P78383 322 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 FAM3AP98173 230 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 CKAP4Q07065 602 aaKnown RBP6.39□□□□□ -1.39
XRN1-212ENST00000486211 IL18R1Q13478 541 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 SNAPC1Q16533 368 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 ANKDD1AQ495B1 522 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 KLHL12Q53G59 568 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 AGBL2Q5U5Z8 902 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 DRAM2Q6UX65 266 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 TCF23Q7RTU1 214 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 OAFQ86UD1 273 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 LYPD6Q86Y78 171 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 OR6V1Q8N148 313 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 STPG2Q8N412 459 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 C11orf65Q8NCR3 313 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 C4orf3Q8WVX3 66 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 ST6GALNAC6Q969X2 333 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 PPCSQ9HAB8 311 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 MOB4Q9Y3A3 225 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 RHBDD3Q9Y3P4 386 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 HSPE1-MOB4S4R3N1 261 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 HERC1Q15751 4861 aa6.39□□□□□ -1.39
XRN1-212ENST00000486211 MEX3AA1L020 520 aaKnown RBP6.38□□□□□ -1.39
XRN1-212ENST00000486211 TMEM210A6NLX4 147 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 CDC42EP2O14613 210 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 ZNF728P0DKX0 622 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 SLC2A1P11166 492 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 PIPP12273 146 aaPredicted RBP6.38□□□□□ -1.39
XRN1-212ENST00000486211 HOXA5P20719 270 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 CASQ1P31415 396 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 BRS3P32247 399 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 GNALP38405 381 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 CDKN2AP42771 156 aaKnown RBP6.38□□□□□ -1.39
XRN1-212ENST00000486211 SLC1A6P48664 564 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 ACTA2P62736 377 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 ACTG2P63267 376 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 ACTC1P68032 377 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 ACTA1P68133 377 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 PAGE3Q5JUK9 113 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 RNLSQ5VYX0 342 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 TEX38Q6PEX7 206 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 SLC16A9Q7RTY1 509 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 CPLX4Q7Z7G2 160 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 NRMQ8IXM6 262 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 OR11H1Q8NG94 326 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 STMN2Q93045 179 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 SPTSSAQ969W0 71 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 MICU1Q9BPX6 476 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 FAM110AQ9BQ89 295 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 ST6GALNAC5Q9BVH7 336 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 PAPOLGQ9BWT3 736 aaKnown RBP6.38□□□□□ -1.39
XRN1-212ENST00000486211 POLR2J2Q9GZM3 115 aaKnown RBP6.38□□□□□ -1.39
XRN1-212ENST00000486211 POLR2J3Q9H1A7 115 aaKnown RBP6.38□□□□□ -1.39
XRN1-212ENST00000486211 A4GNTQ9UNA3 340 aa6.38□□□□□ -1.39
XRN1-212ENST00000486211 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
XRN1-212ENST00000486211 KIAA2026Q5HYC2 2103 aa6.37□□□□□ -1.39
XRN1-212ENST00000486211 DSCAML1Q8TD84 2053 aa6.37□□□□□ -1.39
XRN1-212ENST00000486211 hCG_38984A0A1B0GV85 526 aa6.37□□□□□ -1.39
XRN1-212ENST00000486211 A0A1B0GVY2 172 aa6.37□□□□□ -1.39
XRN1-212ENST00000486211 RFPL4AA6NLU0 287 aa6.37□□□□□ -1.39
XRN1-212ENST00000486211 LINC01548A6NM66 108 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms