RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 KIR3DX1Q9H7L2 352 aa1.4□□□□□ -2.19
GCFC2-209ENST00000486016 LINC00574Q9H8X3 128 aa1.4□□□□□ -2.19
GCFC2-209ENST00000486016 CA10Q9NS85 328 aa1.4□□□□□ -2.19
GCFC2-209ENST00000486016 DHCR7Q9UBM7 475 aaKnown RBP1.4□□□□□ -2.19
GCFC2-209ENST00000486016 PPIL1Q9Y3C6 166 aa1.4□□□□□ -2.19
GCFC2-209ENST00000486016 BRCA1P38398 1863 aaKnown RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 LOC102724200A0A096LPH7 203 aaPredicted RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 TRAV8-4A0A0B4J246 113 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 TRAV8-6A0A0B4J262 113 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 IGHV2OR16-5A0A0B4J2B6 119 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 IGKV1-6A0A0C4DH72 117 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 OR7C2O60412 319 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 TRAPPC6AO75865 159 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 PLEKHA8P1O95397 391 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 ETHE1O95571 254 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 IGKV1-39P01597 117 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 P01737 135 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 IGKV1D-39P04432 117 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 CRYGCP07315 174 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 MMP7P09237 267 aaPredicted RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 NELFEP18615 380 aaKnown RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 CPN2P22792 545 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 GNRHRP30968 328 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 PRSS3P35030 304 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 TGFBR1P36897 503 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 IDH2P48735 452 aaKnown RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 ERFP50548 548 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 PSMC5P62195 406 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 RBX1P62877 108 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 SLC35B1P78383 322 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 C2orf54Q08AI8 447 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 ST3GAL4Q11206 333 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 MAD2L1BPQ15013 274 aaPredicted RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 SP6Q3SY56 376 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 CPTPQ5TA50 214 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 SPINT4Q6UDR6 99 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 C16orf47Q6ZP98 133 aaPredicted RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 BBS7Q8IWZ6 715 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 SLC7A5P1Q8MH63 180 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 ORMDL3Q8N138 153 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 ZCCHC24Q8N2G6 241 aaKnown RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 CYB561A3Q8NBI2 242 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 OR4A15Q8NGL6 344 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 OR5M1Q8NGP8 315 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 OR6K6Q8NGW6 343 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 ING5Q8WYH8 240 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 CHID1Q9BWS9 393 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 FRMD8P1Q9BZ68 369 aaPredicted RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 STMN4Q9H169 189 aaPredicted RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 FANCEQ9HB96 536 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 IFNKQ9P0W0 207 aa1.39□□□□□ -2.19
GCFC2-209ENST00000486016 CHTOPQ9Y3Y2 248 aaKnown RBP1.39□□□□□ -2.19
GCFC2-209ENST00000486016 JCADQ9P266 1359 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 A8MWL6 223 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 PRAMEF26H0Y7S4 382 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 J3QT63 122 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 MFNGO00587 321 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 KDELR3O43731 214 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 CNMDO75829 334 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 OTCP00480 354 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 MAS1P04201 325 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 STAG3L2P0CL84 134 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 HOXB8P17481 243 aaPredicted RBP1.38□□□□□ -2.19
GCFC2-209ENST00000486016 PAX6P26367 422 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 MPV17P39210 176 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 GALR1P47211 349 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 MLF1P58340 268 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 GRB2P62993 217 aaKnown RBP1.38□□□□□ -2.19
GCFC2-209ENST00000486016 BTN1A1Q13410 526 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 TAF9Q16594 264 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 ATP6V1FQ16864 119 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 HSP90AA4PQ58FG1 418 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 HHATQ5VTY9 493 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 MORN3Q6PF18 240 aaPredicted RBP1.38□□□□□ -2.19
GCFC2-209ENST00000486016 C16orf87Q6PH81 154 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 TBPL2Q6SJ96 375 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 EPGNQ6UW88 154 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 CASP12Q6UXS9 341 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 ARHGAP18Q8N392 663 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 LINC00469Q8N7U9 141 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 OR2M7Q8NG81 312 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 OR52N1Q8NH53 320 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 OR51A7Q8NH64 312 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 MRPL48Q96GC5 212 aaKnown RBP1.38□□□□□ -2.19
GCFC2-209ENST00000486016 CENPNQ96H22 339 aaPredicted RBP1.38□□□□□ -2.19
GCFC2-209ENST00000486016 GAL3ST2Q9H3Q3 398 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 LZTFL1Q9NQ48 299 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 RWDD2AQ9UIY3 292 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 RAB22AQ9UL26 194 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 MMACHCQ9Y4U1 282 aa1.38□□□□□ -2.19
GCFC2-209ENST00000486016 TENM1Q9UKZ4 2725 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 A0A0J9YYE9 177 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 TMEM72A0PK05 275 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 CLDN34H7C241 214 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 H7C2Y5 167 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 GMDSO60547 372 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 TRBC1P01850 177 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 RPL31P62899 125 aaKnown RBP1.37□□□□□ -2.19
GCFC2-209ENST00000486016 ADIGQ0VDE8 80 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 IL15RAQ13261 267 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms