RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 LOC110117498-PIK3R3F6TDL0 507 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 TMPRSS2O15393 492 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 MPZL2O60487 215 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 GYPAP02724 150 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 KRT8P05787 483 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 RPSAP08865 295 aaKnown RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 MRPL3P09001 348 aaKnown RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 EGR1P18146 543 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 MPZP25189 248 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 FGF12P61328 243 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 UBA52P62987 128 aaKnown RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 SRSF2Q01130 221 aaKnown RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 FOXL1Q12952 345 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 KPNB1Q14974 876 aaKnown RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 ZSCAN26Q16670 478 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 WDR38Q5JTN6 314 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 RBMS3Q6XE24 437 aaKnown RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 PLEKHG7Q6ZR37 379 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 BTN2A1Q7KYR7 527 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 THAP5Q7Z6K1 395 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 CATSPERDQ86XM0 798 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 ZNF573Q86YE8 665 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 TMEM86BQ8N661 226 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 KIR3DL3Q8N743 410 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 C19orf18Q8NEA5 215 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 OR51G2Q8NGK0 314 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 RHOXF1Q8NHV9 184 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 FAM81AQ8TBF8 368 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 AQP3Q92482 292 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 PPP1R14AQ96A00 147 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 FAM71F1Q96KD3 344 aaPredicted RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 WDFY2Q96P53 400 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 SLC6A7Q99884 636 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 DCTN5Q9BTE1 182 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 C9orf16Q9BUW7 83 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 FGF23Q9GZV9 251 aaPredicted RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 SIRPDQ9H106 197 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 MRPS18AQ9NVS2 196 aaKnown RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 RPUSD1Q9UJJ7 312 aaKnown RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 IKZF2Q9UKS7 526 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 SLC22A13Q9Y226 551 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 PIGLQ9Y2B2 252 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 EXOGQ9Y2C4 368 aaKnown RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 ORC6Q9Y5N6 252 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 CENPVL3A0A0U1RRI6 287 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 PQLC2LA1A4F0 135 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 OR2AT4A6NND4 320 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 ANKRD65E5RJM6 399 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 PSMD9O00233 223 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 SIGLEC5O15389 551 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 SLC16A6O15403 523 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 AKR7A2O43488 359 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 NDUFB3O43676 98 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 TOX4O94842 621 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 ISG15P05161 165 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 RNASE1P07998 156 aaKnown RBP5.78□□□□□ -1.48
VPS50-218ENST00000485994 PGA5P0DJD9 388 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 IGHV4-38-2P0DP08 117 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 HKR1P10072 659 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 PSG2P11465 335 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 GABRB1P18505 474 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 GPM6AP51674 278 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 CCR9P51686 369 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 FUT6P51993 359 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 RPL15P61313 204 aaKnown RBP5.78□□□□□ -1.48
VPS50-218ENST00000485994 ERVK11-1P61568 191 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 CSNK2BP67870 215 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 TNP2Q05952 138 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 GFOD2Q3B7J2 385 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 CDONQ4KMG0 1287 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 LRRC10Q5BKY1 277 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 GPR157Q5UAW9 335 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 METTL11BQ5VVY1 283 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 C16orf87Q6PH81 154 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 C12orf54Q6X4T0 127 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 Q6YL49 198 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 MOB3CQ70IA8 216 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 ZNF771Q7L3S4 317 aaPredicted RBP5.78□□□□□ -1.48
VPS50-218ENST00000485994 SSX6Q7RTT6 188 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 CALHM1Q8IU99 346 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 BCL6BQ8N143 479 aaPredicted RBP5.78□□□□□ -1.48
VPS50-218ENST00000485994 SIGLECL1Q8N7X8 197 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 YIPF7Q8N8F6 280 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 BOLLQ8N9W6 283 aaKnown RBP5.78□□□□□ -1.48
VPS50-218ENST00000485994 POC1AQ8NBT0 407 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 TBC1D15Q8TC07 691 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 RORBQ92753 470 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 RPL3LQ92901 407 aaKnown RBP5.78□□□□□ -1.48
VPS50-218ENST00000485994 GCDHQ92947 438 aaPredicted RBP5.78□□□□□ -1.48
VPS50-218ENST00000485994 UBE2FQ969M7 185 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 SDSLQ96GA7 329 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 C1orf147Q96MC9 270 aaPredicted RBP5.78□□□□□ -1.48
VPS50-218ENST00000485994 ZNF48Q96MX3 618 aaPredicted RBP5.78□□□□□ -1.48
VPS50-218ENST00000485994 RDH12Q96NR8 316 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 TBX15Q96SF7 602 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 CCL13Q99616 98 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 RASSF4Q9H2L5 321 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 HES4Q9HCC6 221 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms