RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	GTF3C1	Q12789	2109 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	NME4	O00746	187 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	SULT1B1	O43704	296 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	RDH16	O75452	317 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	ETHE1	O95571	254 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	IGLV2-23	P01705	113 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	RET	P07949	1114 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	TACSTD2	P09758	323 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	CEACAM6	P40199	344 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	CDKN2B	P42772	138 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	CYB561	P49447	251 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	VSX2	P58304	361 aa	Predicted RBP	4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	ZNF658B	Q4V348	819 aa	Predicted RBP	4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	LYPD2	Q6UXB3	125 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	ASCL4	Q6XD76	172 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	SLC35D2	Q76EJ3	337 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	C6orf120	Q7Z4R8	191 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	FAM71A	Q8IYT1	594 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	KIF2B	Q8N4N8	673 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	CBR4	Q8N4T8	237 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	SNX31	Q8N9S9	440 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	CHST4	Q8NCG5	386 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	OR6Q1	Q8NGQ2	317 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	PHOSPHO2	Q8TCD6	241 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	SEH1L	Q96EE3	360 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	DYNLL2	Q96FJ2	89 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	PORCN	Q9H237	461 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	LINC00597	Q9H2U6	94 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	SLC39A1	Q9NY26	324 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	ATPIF1	Q9UII2	106 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	POFUT2	Q9Y2G5	429 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	CACNG2	Q9Y698	323 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	LAMA4	Q16363	1823 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	MROH7	Q68CQ1	1323 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	DNAH14	Q0VDD8	3507 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	TET1	Q8NFU7	2136 aa		4.36	□□□□□ -1.71
UBR3-210	ENST00000484596	MYH6	P13533	1939 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	GOLGA8Q	A0A0J9YX86	632 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	GSTTP1	A0A1W2PQM5	241 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	PLAC8L1	A1L4L8	177 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	GABRP	O00591	440 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	RTL8C	O15255	209 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	ERI3	O43414	337 aa	Known RBP	4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	TRAPPC3	O43617	180 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	CALU	O43852	315 aa	Predicted RBP	4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	SCN2B	O60939	215 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	ATP5H	O75947	161 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	KLK1	P06870	262 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	NQO2	P16083	231 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	CSK	P41240	450 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	ZNF138	P52744	262 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	ATP5J2	P56134	94 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	CLDN6	P56747	220 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	ZNF121	P58317	390 aa	Predicted RBP	4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	DSTN	P60981	165 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	TNNC1	P63316	161 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	DR1	Q01658	176 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	LRRC63	Q05C16	580 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	ART3	Q13508	389 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	PIGH	Q14442	188 aa	Predicted RBP	4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	POU2AF1	Q16633	256 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	LRRC26	Q2I0M4	334 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	WDR82	Q6UXN9	313 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	LINC00336	Q6ZUF6	198 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	UNC93A	Q86WB7	457 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	NPW	Q8N729	165 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	GATS	Q8NAP1	163 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	ZNF461	Q8TAF7	563 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	LRRC29	Q8WV35	223 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	MRGPRF	Q96AM1	343 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	FAM131C	Q96AQ9	280 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	HINT2	Q9BX68	163 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	POTEKP	Q9BYX7	375 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	OR52A5	Q9H2C5	316 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	DMAP1	Q9NPF5	467 aa	Predicted RBP	4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	MS4A12	Q9NXJ0	267 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	UVRAG	Q9P2Y5	699 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	BRWD1	Q9NSI6	2320 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596	SI	P14410	1827 aa		4.35	□□□□□ -1.71
UBR3-210	ENST00000484596		A0A1W2PRF3	423 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596		A0A1W2PRM7	423 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	LAD1	O00515	517 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	CA11	O75493	328 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	MYO1D	O94832	1006 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	USF1	P22415	310 aa	Predicted RBP	4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	IL32	P24001	234 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	SPAM1	P38567	509 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	CXCL5	P42830	114 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	CRAT	P43155	626 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	DYNLL1	P63167	89 aa	Known RBP	4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	TFDP2	Q14188	446 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	C5orf64	Q2M2E5	130 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	PIGG	Q5H8A4	983 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	TMEM255A	Q5JRV8	349 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	CDKL4	Q5MAI5	379 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	ZNF470	Q6ECI4	717 aa		4.34	□□□□□ -1.71
UBR3-210	ENST00000484596	RWDD4	Q6NW29	188 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms