RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TECTBQ96PL2 329 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 CNN2Q99439 309 aaKnown RBP5.12□□□□□ -1.59
PTCD3-215ENST00000484203 TEAD3Q99594 435 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 TLNRD1Q9H1K6 362 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 MEGF9Q9H1U4 602 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 PRDM13Q9H4Q3 707 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 KRT84Q9NSB2 600 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 RASL12Q9NYN1 266 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 HAO2Q9NYQ3 351 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 DNAJB11Q9UBS4 358 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 AP4S1Q9Y587 144 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 N6AMT1Q9Y5N5 214 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 KPTNQ9Y664 436 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 TENM1Q9UKZ4 2725 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 WNK2Q9Y3S1 2297 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 IGHV3-64DA0A0J9YX35 117 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF816-ZNF321PA0A0X1KG74 233 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 A0A1B0GVI7 797 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 A0A1W2PPH5 198 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 NKX6-3A6NJ46 265 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 OR5B21A6NL26 309 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 SNTNA6NMZ2 147 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 NDUFB3O43676 98 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 TOX4O94842 621 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 CRYBA1P05813 215 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 RPSAP08865 295 aaKnown RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 CLEC2LP0C7M8 214 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 HKR1P10072 659 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 EEF1B2P24534 225 aaKnown RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 RIDAP52758 137 aaKnown RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 FGF12P61328 243 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 SEC61A1P61619 476 aaKnown RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 GNG3P63215 75 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 RIPPLY1Q0D2K3 151 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 APOFQ13790 326 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 BLMHQ13867 455 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 PTGES3Q15185 160 aaKnown RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 GFOD2Q3B7J2 385 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 CEACAM21Q3KPI0 293 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 CDONQ4KMG0 1287 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 FAM76BQ5HYJ3 339 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 C1orf146Q5VVC0 180 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 PRAMEF6Q5VXH4 476 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 NXNL2Q5VZ03 156 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 C16orf87Q6PH81 154 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF841Q6ZN19 808 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 LHFPL2Q6ZUX7 228 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 KCTD8Q6ZWB6 473 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 FAM90A1Q86YD7 464 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 ZDHHC23Q8IYP9 409 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 GCSAMQ8N6F7 178 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 KIR3DL3Q8N743 410 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 SIGLECL1Q8N7X8 197 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 ZDHHC22Q8N966 263 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 BOLLQ8N9W6 283 aaKnown RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 OR5A2Q8NGI9 324 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 LRRC29Q8WV35 223 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 SSMEM1Q8WWF3 244 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 ZNRF4Q8WWF5 429 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 OR5P3Q8WZ94 311 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 RFKQ969G6 155 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 SLC7A6OSQ96CW6 309 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 DUS3LQ96G46 650 aaKnown RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 RNF170Q96K19 258 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 MED20Q9H944 212 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 TVP23BQ9NYZ1 205 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 DNAJC27Q9NZQ0 273 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF69Q9UC07 566 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 WARS2Q9UGM6 360 aaKnown RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 NUFIP1Q9UHK0 495 aaKnown RBP5.11□□□□□ -1.59
PTCD3-215ENST00000484203 ENPP5Q9UJA9 477 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 POLDIP2Q9Y2S7 368 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 RHBDD3Q9Y3P4 386 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 ORC6Q9Y5N6 252 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 POMT1Q9Y6A1 747 aa5.11□□□□□ -1.59
PTCD3-215ENST00000484203 TRAV40A0A0B4J280 105 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 hCG_1809904A0A1W2PP81 198 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 A0A1W2PPE2 198 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 A0A1W2PR64 198 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 A0A1W2PRV1 198 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 BTBD17A6NE02 478 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 DNAJC9-AS1A6NH13 148 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 SRRM5B3KS81 715 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF670-ZNF695F2Z2N8 137 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 DLGAP1O14490 977 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 DVL1O14640 695 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 CDIPTO14735 213 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 TNFRSF13BO14836 293 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-215ENST00000484203 SELENOFO60613 162 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 SULT1C4O75897 302 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 GYPAP02724 150 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 KRT8P05787 483 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 PRKACGP22612 351 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 SLC2A5P22732 501 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 ATP6V1E1P36543 226 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 CDC42P60953 191 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 PRDX4Q13162 271 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 CT83Q5H943 113 aa5.1□□□□□ -1.59
PTCD3-215ENST00000484203 KLF17Q5JT82 389 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF684Q5T5D7 378 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms