RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 DOLPP1Q86YN1 238 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 STEAP2Q8NFT2 490 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 AQP3Q92482 292 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 PIGCQ92535 297 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 HYLS1Q96M11 299 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 ZNF107Q9UII5 783 aaPredicted RBP22.62■■□□□ 1.21
SHOX2-204ENST00000483851 FLVCR2Q9UPI3 526 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 MYO7BQ6PIF6 2116 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 FABP7O15540 132 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 LPLP06858 475 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 CSF1P09603 554 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 TUBG1P23258 451 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 OPRM1P35372 400 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 IDH3GP51553 393 aaPredicted RBP22.62■■□□□ 1.21
SHOX2-204ENST00000483851 PLCXD3Q63HM9 321 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 UNQ6126/PRO20091Q6UXV3 157 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 FAM89BQ8N5H3 189 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 OR56B1Q8NGI3 324 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 OR10R2Q8NGX6 335 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 WBP1Q96G27 269 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 TUBG2Q9NRH3 451 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 ING4Q9UNL4 249 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 OR5H1A6NKK0 313 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 ZNF780AO75290 641 aaPredicted RBP22.61■■□□□ 1.21
SHOX2-204ENST00000483851 MPIG6BO95866 241 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 HPXP02790 462 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 RBPJQ06330 500 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 ZNF260Q3ZCT1 412 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 FBXW12Q6X9E4 464 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 MOB3CQ70IA8 216 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 RPRMLQ8N4K4 120 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 ACBD4Q8NC06 268 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 TMEM104Q8NE00 496 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 PIGMQ9H3S5 423 aa22.61■■□□□ 1.21
SHOX2-204ENST00000483851 PRRC2CQ9Y520 2896 aaKnown RBP22.61■■□□□ 1.21
SHOX2-204ENST00000483851 PIEZO1Q92508 2521 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 MEIKINA0A087WXM9 373 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 A0A1B0GUH1 482 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 MSTNO14793 375 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 CRTAPO75718 401 aaPredicted RBP22.6■■□□□ 1.21
SHOX2-204ENST00000483851 RPS27AP62979 156 aaKnown RBP22.6■■□□□ 1.21
SHOX2-204ENST00000483851 MOGAT2Q3SYC2 334 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 SLC22A6Q4U2R8 563 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 RFPL4BQ6ZWI9 263 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 PXT1Q8NFP0 134 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 SEH1LQ96EE3 360 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 TM2D1Q9BX74 207 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 NPTNQ9Y639 398 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 DMXL2Q8TDJ6 3036 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 FAM230AA0A1W2PPH8 454 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 CD300LBA8K4G0 201 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 ANXA3P12429 323 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 FAUP35544 74 aaKnown RBP22.6■■□□□ 1.21
SHOX2-204ENST00000483851 C1orf174Q8IYL3 243 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 BEST4Q8NFU0 473 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 OR5D18Q8NGL1 313 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 METTL9Q9H1A3 318 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 PCDHB16Q9NRJ7 776 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 NKIRAS2Q9NYR9 191 aa22.6■■□□□ 1.21
SHOX2-204ENST00000483851 NDUFB6O95139 128 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 IGLV1-44P01699 117 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 VEGFCP49767 419 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 HLXQ14774 488 aaPredicted RBP22.59■■□□□ 1.21
SHOX2-204ENST00000483851 ARL6IP1Q15041 203 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 TSC22D1Q15714 1073 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 C1QL2Q7Z5L3 287 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 C9orf62Q8N4C0 152 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 MED30Q96HR3 178 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 PAPOLGQ9BWT3 736 aaKnown RBP22.59■■□□□ 1.21
SHOX2-204ENST00000483851 OR10A4Q9H209 315 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 ASF1BQ9NVP2 202 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 IL36GQ9NZH8 169 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 MPC1Q9Y5U8 109 aa22.59■■□□□ 1.21
SHOX2-204ENST00000483851 IGKV1-27A0A075B6S5 117 aa22.58■■□□□ 1.21
SHOX2-204ENST00000483851 ZNF850A8MQ14 1090 aa22.58■■□□□ 1.21
SHOX2-204ENST00000483851 SMPD2O60906 423 aa22.58■■□□□ 1.21
SHOX2-204ENST00000483851 CELA3BP08861 270 aa22.58■■□□□ 1.21
SHOX2-204ENST00000483851 GSTP1P09211 210 aaKnown RBP22.58■■□□□ 1.21
SHOX2-204ENST00000483851 TMEM225BP0DP42 221 aa22.58■■□□□ 1.21
SHOX2-204ENST00000483851 PRSS12P56730 875 aa22.58■■□□□ 1.21
SHOX2-204ENST00000483851 DMRTC1Q5HYR2 192 aa22.58■■□□□ 1.21
SHOX2-204ENST00000483851 ZNF474Q6S9Z5 364 aaPredicted RBP22.58■■□□□ 1.21
SHOX2-204ENST00000483851 ZSCAN4Q8NAM6 433 aaPredicted RBP22.58■■□□□ 1.21
SHOX2-204ENST00000483851 GAL3ST1Q99999 423 aa22.58■■□□□ 1.21
SHOX2-204ENST00000483851 ZNF629Q9UEG4 869 aaPredicted RBP22.58■■□□□ 1.21
SHOX2-204ENST00000483851 A0A1W2PR80 420 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 MGMTP16455 207 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 PRDX4Q13162 271 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 CEACAM21Q3KPI0 293 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 C3orf36Q3SXR2 165 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 TIMM23BQ5SRD1 257 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 FAAP20Q6NZ36 180 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 Q6ZTK2 550 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 ZDHHC23Q8IYP9 409 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 MRPS24Q96EL2 167 aaKnown RBP22.58■■□□□ 1.2
SHOX2-204ENST00000483851 POM121Q96HA1 1249 aa22.58■■□□□ 1.2
SHOX2-204ENST00000483851 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.58■■□□□ 1.2
SHOX2-204ENST00000483851 NPDC1Q9NQX5 325 aaPredicted RBP22.58■■□□□ 1.2
SHOX2-204ENST00000483851 C1QTNF9BB2RNN3 333 aa22.57■■□□□ 1.2
SHOX2-204ENST00000483851 ARPC1BO15143 372 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms